Plotting Tool for Brain Atlases
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Documentation for package ‘ggseg’ version 1.6.5
Help Pages
| adapt_scales | Scale ggseg plot axes. |
| aseg | Freesurfer automatic subcortical segmentation of a brain volume |
| as_brain_atlas | Create brain atlas |
| as_ggseg_atlas | Create ggseg atlas |
| as_ggseg_atlas.brain_atlas | Create ggseg atlas |
| as_ggseg_atlas.data.frame | Create ggseg atlas |
| as_ggseg_atlas.default | Create ggseg atlas |
| as_ggseg_atlas.ggseg_atlas | Create ggseg atlas |
| brain_atlas | Constructor for brain atlas |
| brain_join | Join atlas and data |
| brain_labels | Extract unique labels of brain regions |
| brain_labels.brain_atlas | Extract unique labels of brain regions |
| brain_labels.ggseg_atlas | Extract unique labels of brain regions |
| brain_pal | Generate palettes from the ggseg atlases |
| brain_pals_info | Get info on brain palettes |
| brain_regions | Extract unique names of brain regions |
| brain_regions.brain_atlas | Extract unique names of brain regions |
| brain_regions.data.frame | Extract unique names of brain regions |
| brain_regions.ggseg_atlas | Extract unique names of brain regions |
| dk | Desikan-Killiany Cortical Atlas |
| GeomBrain | Brain geom |
| geom_brain | Brain geom |
| ggseg_atlas | 'ggseg_atlas' class |
| is_brain_atlas | Validate brain atlas |
| is_ggseg_atlas | Validate ggseg_atlas |
| position_brain | Alter brain atlas position |
| read_atlas_files | Read in atlas data from all subjects |
| read_freesurfer_stats | Read in raw FreeSurfer stats file |
| read_freesurfer_table | Read in stats table from FreeSurfer |
| reposition_brain | Reposition brain slices |
| scale_brain | Colour and fill scales from the ggseg atlases |
| scale_brain2 | Colour and fill scales from the ggseg atlases |
| scale_color_brain | Colour and fill scales from the ggseg atlases |
| scale_color_brain2 | Colour and fill scales from the ggseg atlases |
| scale_colour_brain | Colour and fill scales from the ggseg atlases |
| scale_colour_brain2 | Colour and fill scales from the ggseg atlases |
| scale_continous_brain | Axis and label scales from the ggseg atlases |
| scale_fill_brain | Colour and fill scales from the ggseg atlases |
| scale_fill_brain2 | Colour and fill scales from the ggseg atlases |
| scale_labs_brain | Axis and label scales from the ggseg atlases |
| scale_x_brain | Axis and label scales from the ggseg atlases |
| scale_y_brain | Axis and label scales from the ggseg atlases |
| theme_brain | ggseg plot theme |
| theme_brain2 | ggseg plot theme |
| theme_custombrain | ggseg plot theme |
| theme_darkbrain | ggseg plot theme |