chisq_g4                Chi Square test when genotypes are known
chisq_gl4               Chi-Sq for GL
em_li                   EM algorithm from Li (2011)
gcount_to_gvec          Converts genotype counts to genotype vectors.
gvec_to_gcount          Inverse function of 'gcount_to_gvec()'.
is_valid_2              Tests if the two parameter model is valid
iter.array              Iterator over array
like_gknown_2           Likelihood under three parameter model when
                        genotypes are known
like_gknown_3           Likelihood under three parameter model when
                        genotypes are known
like_glpknown_2         Likelihood under three parameter model when
                        using offspring genotypes likelihoods but
                        parent genotypes are known.
like_glpknown_3         Likelihood under three parameter model when
                        using offspring genotypes likelihoods but
                        parent genotypes are known.
llike_li                Objective function for 'em_li()'
lrt_men_g4              Likelihood ratio test for segregation
                        distortion with known genotypes
lrt_men_gl4             Likelihood ratio test using genotype
                        likelihoods.
multi_lrt               Parallelized likelihood ratio test for
                        segregation distortion.
multidog_to_g           Converts multidog output to a format usable for
                        multi_lrt()
nextElem.arrayiter      Next element in an array
offspring_geno          Simulates genotypes given genotype frequencies.
offspring_gf_2          Calculates offspring genotype frequencies under
                        the two-parameter model.
offspring_gf_3          Calculates offspring genotype frequencies under
                        the three-parameter model.
otest_g                 Jointly tests for segregation distortion and
                        number of incompatible genotypes
po_gl                   Generate genotype likelihoods from offspring
                        genotypes.
polymapr_test           Run segregation distortion tests as implemented
                        in the polymapR package.
pvec_tet_2              Tetraploid gamete frequencies of gametes when
                        one parent's genotype is known
pvec_tet_3              Tetraploid gamete frequencies of gametes when
                        one parent's genotype is known
simf1g                  Simulate genotype counts from F1 individuals
simf1gl                 Simulate genotype likelihoods of F1
                        individuals.
simgl                   Simulate genotype likelihoods from genotype
                        counts
three_to_two            Convert from three parameters to two parameters
ufit                    Genotype data from Cappai et al. (2020)
