Package: mxfda
Title: A Functional Data Analysis Package for Spatial Single Cell Data
Version: 0.2.2-1
Date: 2025-02-19
Authors@R: 
    c(
    person("Julia", "Wrobel", role = c("aut"), 
    email = "julia.wrobel@emory.edu",
    comment = c(ORCID = "0000-0001-6783-1421")),
    person("Alex", "Soupir", role = c("aut", "cre"),
    comment = c(ORCID = "0000-0003-1251-9179"),
    email = "alex.soupir@moffitt.org")
    )
Description: Methods and tools for deriving spatial summary functions from single-cell imaging
  data and performing functional data analyses. Functions can be applied to other single-cell
  technologies such as spatial transcriptomics. Functional regression and functional principal component analysis methods
  are in the 'refund' package <https://cran.r-project.org/package=refund> while calculation of the
  spatial summary functions are from the 'spatstat' package <https://spatstat.org/>.
License: MIT + file LICENSE
URL: https://github.com/julia-wrobel/mxfda/,
        http://juliawrobel.com/mxfda/
BugReports: https://github.com/julia-wrobel/mxfda/issues/
Encoding: UTF-8
RoxygenNote: 7.3.2
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), tidyverse, survival,
        ggpubr, spatialTIME, tibble, broom, refund.shiny, Seurat,
        SeuratObject
Imports: magrittr, rlang, tidyr, purrr, dplyr, ggplot2, lifecycle,
        methods, stats, refund (>= 0.1-35), reshape2, mgcv,
        spatstat.geom, spatstat.explore, SpatEntropy, SimDesign
Depends: R (>= 2.10),
LazyData: true
LazyDataCompression: bzip2
Config/testthat/edition: 3
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2025-02-19 20:58:32 UTC; 4471592
Author: Julia Wrobel [aut] (<https://orcid.org/0000-0001-6783-1421>),
  Alex Soupir [aut, cre] (<https://orcid.org/0000-0003-1251-9179>)
Maintainer: Alex Soupir <alex.soupir@moffitt.org>
Repository: CRAN
Date/Publication: 2025-02-19 21:10:02 UTC
Built: R 4.5.3; ; 2026-04-19 04:05:54 UTC; windows
