Package: syrona
Type: Package
Title: Stratified Prevalence Comparison Across OMOP CDM Datasets
Version: 0.2.1
Authors@R: person("Maarja", "Pajusalu", email = "maarja.pajusalu@ut.ee",
    role = c("aut", "cre"))
Description: Derives stratified prevalence tables from the condition,
    procedure, and drug records in OMOP CDM (Observational Medical Outcomes
    Partnership Common Data Model) databases, computes log2 prevalence ratios
    between paired datasets, and synthesizes them via random-effects
    meta-analysis at multiple aggregation levels (year, age group, and sex).
    Between-study variance is estimated with the Paule-Mandel method, as
    described in Paule and Mandel (1982) <doi:10.6028/jres.087.022>.
License: MIT + file LICENSE
URL: https://github.com/HealthInformaticsUT/Syrona
BugReports: https://github.com/HealthInformaticsUT/Syrona/issues
Encoding: UTF-8
Language: en-US
Depends: R (>= 4.1.0)
Imports: dplyr (>= 1.1.0), dbplyr (>= 2.3.0), DBI (>= 1.2.0),
        CDMConnector (>= 2.0.0), omopgenerics (>= 1.3.0), tibble,
        tidyr, cli, rlang, shiny, ggplot2, ggiraph, ggtext, scales,
        grDevices, stats, readr (>= 2.0.0), meta (>= 6.0.0)
Suggests: testthat (>= 3.0.0), duckdb (>= 0.9.0), RPostgres,
        CohortConstructor (>= 0.6.0), DT, shinycssloaders, knitr,
        rmarkdown
Config/testthat/edition: 3
VignetteBuilder: knitr
Config/roxygen2/version: 8.0.0
NeedsCompilation: no
Packaged: 2026-08-06 12:34:32 UTC; maarjapajusalu
Author: Maarja Pajusalu [aut, cre]
Maintainer: Maarja Pajusalu <maarja.pajusalu@ut.ee>
Repository: CRAN
Date/Publication: 2026-09-04 20:10:02 UTC
