Last updated on 2026-02-08 01:50:36 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 8.20 | 989.18 | 997.38 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.1 | 4.92 | 263.16 | 268.08 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.1 | 13.00 | 657.25 | 670.25 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.1 | 12.00 | 640.48 | 652.48 | OK | |
| r-devel-windows-x86_64 | 1.0.1 | 16.00 | 324.00 | 340.00 | OK | |
| r-patched-linux-x86_64 | 1.0.0 | 7.63 | 913.91 | 921.54 | ERROR | |
| r-release-linux-x86_64 | 1.0.1 | 7.24 | 383.86 | 391.10 | OK | |
| r-release-macos-arm64 | 1.0.1 | 2.00 | 76.00 | 78.00 | OK | |
| r-release-macos-x86_64 | 1.0.1 | 5.00 | 302.00 | 307.00 | OK | |
| r-release-windows-x86_64 | 1.0.0 | 10.00 | 812.00 | 822.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.1 | 2.00 | 80.00 | 82.00 | OK | |
| r-oldrel-macos-x86_64 | 1.0.1 | 15.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.0.0 | 16.00 | 1064.00 | 1080.00 | ERROR |
Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘database_characteristics.Rmd’ using rmarkdown
--- finished re-building ‘database_characteristics.Rmd’
--- re-building ‘missing_data.Rmd’ using rmarkdown
--- finished re-building ‘missing_data.Rmd’
--- re-building ‘summarise_clinical_tables_records.Rmd’ using rmarkdown
--- finished re-building ‘summarise_clinical_tables_records.Rmd’
--- re-building ‘summarise_concept_id_counts.Rmd’ using rmarkdown
--- finished re-building ‘summarise_concept_id_counts.Rmd’
--- re-building ‘summarise_observation_period.Rmd’ using rmarkdown
Quitting from summarise_observation_period.Rmd:160-168 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (x$plot_header_text_bold) ...`:
! argument is of length zero
---
Backtrace:
▆
1. └─OmopSketch::plotObservationPeriod(...)
2. └─visOmopResults::barPlot(...)
3. └─visOmopResults:::validateStyle(style = style, obj = "plot", type = type)
4. └─visOmopResults:::formatPlotStyle(x = internalStyle, fontsizeRef = fontsizeRef)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summarise_observation_period.Rmd' failed with diagnostics:
argument is of length zero
--- failed re-building ‘summarise_observation_period.Rmd’
--- re-building ‘summarise_person.Rmd’ using rmarkdown
--- finished re-building ‘summarise_person.Rmd’
--- re-building ‘summarise_trend.Rmd’ using rmarkdown
Quitting from summarise_trend.Rmd:262-277 [unnamed-chunk-15]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (x$plot_header_text_bold) ...`:
! argument is of length zero
---
Backtrace:
▆
1. └─OmopSketch::plotTrend(result = result, colour = "sex", facet = "age_group")
2. └─visOmopResults::scatterPlot(...)
3. └─visOmopResults:::validateStyle(style = style, obj = "plot", type = type)
4. └─visOmopResults:::formatPlotStyle(x = internalStyle, fontsizeRef = fontsizeRef)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summarise_trend.Rmd' failed with diagnostics:
argument is of length zero
--- failed re-building ‘summarise_trend.Rmd’
SUMMARY: processing the following files failed:
‘summarise_observation_period.Rmd’ ‘summarise_trend.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.0.1
Check: package dependencies
Result: ERROR
Package required and available but unsuitable version: ‘PatientProfiles’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-oldrel-macos-x86_64
Version: 1.0.0
Check: installed package size
Result: NOTE
installed size is 31.7Mb
sub-directories of 1Mb or more:
doc 29.4Mb
help 2.0Mb
Flavor: r-oldrel-windows-x86_64
Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'database_characteristics.Rmd' using rmarkdown
--- finished re-building 'database_characteristics.Rmd'
--- re-building 'missing_data.Rmd' using rmarkdown
--- finished re-building 'missing_data.Rmd'
--- re-building 'summarise_clinical_tables_records.Rmd' using rmarkdown
--- finished re-building 'summarise_clinical_tables_records.Rmd'
--- re-building 'summarise_concept_id_counts.Rmd' using rmarkdown
--- finished re-building 'summarise_concept_id_counts.Rmd'
--- re-building 'summarise_observation_period.Rmd' using rmarkdown
Quitting from summarise_observation_period.Rmd:160-168 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (x$plot_header_text_bold) ...`:
! argument is of length zero
---
Backtrace:
▆
1. └─OmopSketch::plotObservationPeriod(...)
2. └─visOmopResults::barPlot(...)
3. └─visOmopResults:::validateStyle(style = style, obj = "plot", type = type)
4. └─visOmopResults:::formatPlotStyle(x = internalStyle, fontsizeRef = fontsizeRef)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summarise_observation_period.Rmd' failed with diagnostics:
argument is of length zero
--- failed re-building 'summarise_observation_period.Rmd'
--- re-building 'summarise_person.Rmd' using rmarkdown
--- finished re-building 'summarise_person.Rmd'
--- re-building 'summarise_trend.Rmd' using rmarkdown
Quitting from summarise_trend.Rmd:262-277 [unnamed-chunk-15]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (x$plot_header_text_bold) ...`:
! argument is of length zero
---
Backtrace:
▆
1. └─OmopSketch::plotTrend(result = result, colour = "sex", facet = "age_group")
2. └─visOmopResults::scatterPlot(...)
3. └─visOmopResults:::validateStyle(style = style, obj = "plot", type = type)
4. └─visOmopResults:::formatPlotStyle(x = internalStyle, fontsizeRef = fontsizeRef)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'summarise_trend.Rmd' failed with diagnostics:
argument is of length zero
--- failed re-building 'summarise_trend.Rmd'
SUMMARY: processing the following files failed:
'summarise_observation_period.Rmd' 'summarise_trend.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-windows-x86_64