Last updated on 2026-03-06 13:49:37 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.0.5 | 10.52 | 161.01 | 171.53 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.0.5 | 6.79 | 122.42 | 129.21 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.0.5 | 19.00 | 309.16 | 328.16 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.0.5 | 18.00 | 299.00 | 317.00 | ERROR | |
| r-devel-macos-arm64 | 0.0.5 | 3.00 | 64.00 | 67.00 | OK | |
| r-devel-windows-x86_64 | 0.0.5 | 12.00 | 210.00 | 222.00 | OK | |
| r-patched-linux-x86_64 | 0.0.5 | 9.23 | 198.44 | 207.67 | OK | |
| r-release-linux-x86_64 | 0.0.5 | 10.29 | 198.20 | 208.49 | OK | |
| r-release-macos-arm64 | 0.0.5 | 3.00 | 63.00 | 66.00 | ERROR | |
| r-release-macos-x86_64 | 0.0.5 | 7.00 | 193.00 | 200.00 | ERROR | |
| r-release-windows-x86_64 | 0.0.5 | 11.00 | 202.00 | 213.00 | OK | |
| r-oldrel-macos-arm64 | 0.0.5 | 2.00 | 70.00 | 72.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.0.5 | 7.00 | 199.00 | 206.00 | ERROR | |
| r-oldrel-windows-x86_64 | 0.0.5 | 16.00 | 263.00 | 279.00 | OK |
Version: 0.0.5
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘gaawr2.Rmd’ using rmarkdown
Failed with error: 'there is no package called 'EnsDb.Hsapiens.v75''
Failed with error: 'there is no package called 'ensembldb''
Failed with error: 'there is no package called 'biomaRt''
running: bash -c "export message=\"Hello, world!\"
echo \"print('\$message')\" > hello.R
R CMD BATCH hello.R
R --no-save -q < hello.R
R --no-save -q <<END
message <- Sys.getenv(\"message\"); print(message)
source(\"hello.R\")
END
echo \${message} | \\
Rscript -e '
message <- scan(\"stdin\", what=\"\", sep=\"\\n\", quiet=TRUE);
write.table(message, col.names=FALSE, row.names=FALSE,
quote=FALSE)
' | \\
cat
rm hello.*"
Quitting from gaawr2.Rmd:415-421 [ensdb]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `loadNamespace()`:
! there is no package called 'ensembldb'
---
Backtrace:
▆
1. └─base::loadNamespace(x)
2. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
3. └─base (local) withOneRestart(expr, restarts[[1L]])
4. └─base (local) doWithOneRestart(return(expr), restart)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'gaawr2.Rmd' failed with diagnostics:
there is no package called 'ensembldb'
--- failed re-building ‘gaawr2.Rmd’
--- re-building ‘web.Rmd’ using rmarkdown
Failed with error: 'there is no package called 'Rsamtools''
[WARNING] Citeproc: citation tsv not found
--- finished re-building ‘web.Rmd’
SUMMARY: processing the following file failed:
‘gaawr2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.0.5
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘gaawr2.Rmd’ using rmarkdown
Failed with error: 'there is no package called 'EnsDb.Hsapiens.v75''
Failed with error: 'there is no package called 'ensembldb''
running: bash -c "export message=\"Hello, world!\"
echo \"print('\$message')\" > hello.R
R CMD BATCH hello.R
R --no-save -q < hello.R
R --no-save -q <<END
message <- Sys.getenv(\"message\"); print(message)
source(\"hello.R\")
END
echo \${message} | \\
Rscript -e '
message <- scan(\"stdin\", what=\"\", sep=\"\\n\", quiet=TRUE);
write.table(message, col.names=FALSE, row.names=FALSE,
quote=FALSE)
' | \\
cat
rm hello.*"
Quitting from gaawr2.Rmd:415-421 [ensdb]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `loadNamespace()`:
! there is no package called 'ensembldb'
---
Backtrace:
▆
1. └─base::loadNamespace(x)
2. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
3. └─base (local) withOneRestart(expr, restarts[[1L]])
4. └─base (local) doWithOneRestart(return(expr), restart)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'gaawr2.Rmd' failed with diagnostics:
there is no package called 'ensembldb'
--- failed re-building ‘gaawr2.Rmd’
--- re-building ‘web.Rmd’ using rmarkdown
Failed with error: 'there is no package called 'Rsamtools''
[WARNING] Citeproc: citation tsv not found
--- finished re-building ‘web.Rmd’
SUMMARY: processing the following file failed:
‘gaawr2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.0.5
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘gaawr2.Rmd’ using rmarkdown
Failed with error: 'there is no package called 'EnsDb.Hsapiens.v75''
running: bash -c "export message=\"Hello, world!\"
echo \"print('\$message')\" > hello.R
R CMD BATCH hello.R
R --no-save -q < hello.R
R --no-save -q <<END
message <- Sys.getenv(\"message\"); print(message)
source(\"hello.R\")
END
echo \${message} | \\
Rscript -e '
message <- scan(\"stdin\", what=\"\", sep=\"\\n\", quiet=TRUE);
write.table(message, col.names=FALSE, row.names=FALSE,
quote=FALSE)
' | \\
cat
rm hello.*"
Quitting from gaawr2.Rmd:415-421 [ensdb]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `h()`:
! error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found
---
Backtrace:
▆
1. ├─ensembldb::metadata(EnsDb.Hsapiens.v75)
2. └─base::.handleSimpleError(...)
3. └─base (local) h(simpleError(msg, call))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'gaawr2.Rmd' failed with diagnostics:
error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found
--- failed re-building ‘gaawr2.Rmd’
--- re-building ‘web.Rmd’ using rmarkdown
[WARNING] Citeproc: citation tsv not found
--- finished re-building ‘web.Rmd’
SUMMARY: processing the following file failed:
‘gaawr2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.0.5
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘EnsDb.Hsapiens.v75’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64