Last updated on 2024-10-06 01:50:03 CEST.
| Package | ERROR | OK |
|---|---|---|
| airqualityES | 13 | |
| geneHummus | 13 | |
| refseqR | 2 | 11 |
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: ERROR: 2, OK: 11
Version: 1.1.4
Check: examples
Result: ERROR
Running examples in ‘refseqR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: refseq_GeneID
> ### Title: Get the GeneID
> ### Aliases: refseq_GeneID
>
> ### ** Examples
>
> # Get the gene symbol from a set of transcript accessions
> transcript = c("XM_004487701", "XM_004488493")
> sapply(transcript, function(x) refseq_GeneID (x, db = "nuccore", retries = 4), USE.NAMES = FALSE)
Error: HTTP failure: 500
Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64
Version: 1.1.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘refseqR.Rmd’ using rmarkdown
Quitting from lines 90-92 [unnamed-chunk-7] (refseqR.Rmd)
Error: processing vignette 'refseqR.Rmd' failed with diagnostics:
HTTP failure: 500
--- failed re-building ‘refseqR.Rmd’
SUMMARY: processing the following file failed:
‘refseqR.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘refseqR.Rmd’ using rmarkdown
Quitting from lines 140-142 [unnamed-chunk-15] (refseqR.Rmd)
Error: processing vignette 'refseqR.Rmd' failed with diagnostics:
HTTP failure: 500
--- failed re-building ‘refseqR.Rmd’
SUMMARY: processing the following file failed:
‘refseqR.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64