Last updated on 2026-08-16 12:50:20 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.0.2 | 2.14 | 44.23 | 46.37 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.0.2 | 2.01 | 34.82 | 36.83 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.0.2 | 31.55 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.0.2 | 68.40 | OK | |||
| r-devel-windows-x86_64 | 0.0.2 | 5.00 | 64.00 | 69.00 | OK | |
| r-patched-linux-x86_64 | 0.0.2 | 2.31 | 41.02 | 43.33 | OK | |
| r-release-linux-x86_64 | 0.0.2 | 2.16 | 40.51 | 42.67 | OK | |
| r-release-macos-arm64 | 0.0.2 | 1.00 | 75.00 | 76.00 | OK | |
| r-release-macos-x86_64 | 0.0.2 | 2.00 | 172.00 | 174.00 | OK | |
| r-release-windows-x86_64 | 0.0.2 | 4.00 | 0.00 | 4.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.0.2 | 1.00 | 70.00 | 71.00 | OK | |
| r-oldrel-macos-x86_64 | 0.0.2 | 2.00 | 173.00 | 175.00 | OK | |
| r-oldrel-windows-x86_64 | 0.0.2 | 6.00 | 76.00 | 82.00 | OK |
Version: 0.0.2
Check: examples
Result: ERROR
Running examples in 'manifesto-Ex.R' failed
The error most likely occurred in:
> ### Name: manifest_install
> ### Title: Install packages from a manifesto manifest
> ### Aliases: manifest_install
>
> ### ** Examples
>
> manifest_install(
+ path = system.file(package = 'manifesto', 'minimal.toml'),
+ dry_run = TRUE
+ )
Warning in url(sprintf("%s/%s", cran, path), open = "rb") :
URL 'https://bioconductor.statistik.tu-dortmund.de/cran/web/packages/packages.rds': status was 'Could not connect to server'
Error in url(sprintf("%s/%s", cran, path), open = "rb") :
cannot open the connection to 'https://bioconductor.statistik.tu-dortmund.de/cran/web/packages/packages.rds'
Calls: manifest_install ... <Anonymous> -> as.data.frame -> read_CRAN_object -> gzcon -> url
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.0.2
Check: tests
Result: ERROR
Running 'testthat.R' [67s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(manifesto)
>
> test_check('manifesto')
Saving _problems/test-install-3.R
Saving _problems/test-install-11.R
Saving _problems/test-install-19.R
* Required R version: "4.1.0"
Dependencies:
* default: dplyr (">= 1.0.0")
* Manifesto version: "0.0.1"
* Project name: "myproject"
* Project version: "1.2.3"
* Required R version: "4.3.2"
i No system dependencies listed in the manifest.
[ FAIL 3 | WARN 3 | SKIP 3 | PASS 117 ]
══ Skipped tests (3) ═══════════════════════════════════════════════════════════
• On CRAN (3): 'test-peek.R:10:1', 'test-peek.R:15:1', 'test-peek.R:20:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-install.R:3:3'): `manifest_install()` returns refs for core only ──
Error in `url(sprintf("%s/%s", cran, path), open = "rb")`: cannot open the connection to 'https://bioconductor.statistik.tu-dortmund.de/cran/web/packages/packages.rds'
Backtrace:
▆
1. └─manifesto::manifest_install(path = path, dry_run = TRUE) at test-install.R:3:3
2. └─manifesto:::negotiate_ge(refs)
3. └─tools::CRAN_package_db()
4. ├─base::as.data.frame(...)
5. └─tools:::read_CRAN_object(CRAN_baseurl_for_web_area(), "web/packages/packages.rds")
6. ├─base::gzcon(url(sprintf("%s/%s", cran, path), open = "rb"))
7. └─base::url(sprintf("%s/%s", cran, path), open = "rb")
── Error ('test-install.R:11:3'): `manifest_install()` returns refs for core + dev ──
Error in `url(sprintf("%s/%s", cran, path), open = "rb")`: cannot open the connection to 'https://bioconductor.statistik.tu-dortmund.de/cran/web/packages/packages.rds'
Backtrace:
▆
1. └─manifesto::manifest_install(path = path, groups = "dev", dry_run = TRUE) at test-install.R:11:3
2. └─manifesto:::negotiate_ge(refs)
3. └─tools::CRAN_package_db()
4. ├─base::as.data.frame(...)
5. └─tools:::read_CRAN_object(CRAN_baseurl_for_web_area(), "web/packages/packages.rds")
6. ├─base::gzcon(url(sprintf("%s/%s", cran, path), open = "rb"))
7. └─base::url(sprintf("%s/%s", cran, path), open = "rb")
── Error ('test-install.R:19:3'): `manifest_install()` returns deduplicated refs if package is in multiple groups ──
Error in `url(sprintf("%s/%s", cran, path), open = "rb")`: cannot open the connection to 'https://bioconductor.statistik.tu-dortmund.de/cran/web/packages/packages.rds'
Backtrace:
▆
1. └─manifesto::manifest_install(...) at test-install.R:19:3
2. └─manifesto:::negotiate_ge(refs)
3. └─tools::CRAN_package_db()
4. ├─base::as.data.frame(...)
5. └─tools:::read_CRAN_object(CRAN_baseurl_for_web_area(), "web/packages/packages.rds")
6. ├─base::gzcon(url(sprintf("%s/%s", cran, path), open = "rb"))
7. └─base::url(sprintf("%s/%s", cran, path), open = "rb")
[ FAIL 3 | WARN 3 | SKIP 3 | PASS 117 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.0.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'manifesto.Rmd' using rmarkdown
Quitting from manifesto.Rmd:60-62 [unnamed-chunk-8]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `url()`:
! cannot open the connection to 'https://bioconductor.statistik.tu-dortmund.de/cran/web/packages/packages.rds'
---
Backtrace:
▆
1. └─manifesto::manifest_install(manifest_path, dry_run = TRUE)
2. └─manifesto:::negotiate_ge(refs)
3. └─tools::CRAN_package_db()
4. ├─base::as.data.frame(...)
5. └─tools:::read_CRAN_object(CRAN_baseurl_for_web_area(), "web/packages/packages.rds")
6. ├─base::gzcon(url(sprintf("%s/%s", cran, path), open = "rb"))
7. └─base::url(sprintf("%s/%s", cran, path), open = "rb")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'manifesto.Rmd' failed with diagnostics:
cannot open the connection to 'https://bioconductor.statistik.tu-dortmund.de/cran/web/packages/packages.rds'
--- failed re-building 'manifesto.Rmd'
SUMMARY: processing the following file failed:
'manifesto.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-windows-x86_64