Last updated on 2026-01-09 00:49:01 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.04 | 246.46 | 259.50 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.46 | 331.31 | 341.77 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 27.00 | 350.69 | 377.69 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 194.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.99 | 276.36 | 291.35 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.05 | 254.30 | 269.35 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 304.00 | 314.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 190.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 198.00 | 208.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 248.00 | 271.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [107s/258s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.542, system: 0.043, elapsed: 2.549 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.584, system: 0.050, elapsed: 14.971 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.020, elapsed: 1.020 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.852, system: 0.767, elapsed: 56.942 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.170 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.945, system: 0.911, elapsed: 76.537 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.042, elapsed: 2.119 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.589, system: 0.090, elapsed: 15.717 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.016, elapsed: 1.197 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.186, system: 0.878, elapsed: 53.630 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.004, elapsed: 0.177 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.464, system: 1.064, elapsed: 73.625 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.684, system: 0.049, elapsed: 1.907 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.507, system: 0.063, elapsed: 12.929 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.224, system: 0.015, elapsed: 0.736 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.519, system: 0.843, elapsed: 10.632 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.170 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.229, system: 0.222, elapsed: 0.925 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 23.066, system: 1.247, elapsed: 28.106 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.520, system: 0.037, elapsed: 2.171 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.567, system: 0.083, elapsed: 13.414 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.014, elapsed: 0.653 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.925, system: 0.698, elapsed: 40.262 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.004, elapsed: 0.199 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 14.027, system: 0.816, elapsed: 15.161 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.144, system: 1.678, elapsed: 72.628 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/129s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.597, system: 0.040, elapsed: 3.450 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.582, system: 0.065, elapsed: 20.042 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.017, elapsed: 0.328 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.253, system: 0.436, elapsed: 7.013 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.263 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.372, system: 0.589, elapsed: 32.216 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.566, system: 0.031, elapsed: 2.474 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.559, system: 0.048, elapsed: 13.835 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.013, elapsed: 0.314 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.208, system: 0.409, elapsed: 6.679 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.003, elapsed: 0.272 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.253, system: 0.523, elapsed: 24.417 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.614, system: 0.031, elapsed: 2.619 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.504, system: 0.051, elapsed: 13.315 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.014, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.342, system: 0.405, elapsed: 6.592 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.237 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.137, system: 0.250, elapsed: 1.009 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.628, system: 0.780, elapsed: 25.053 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.034, elapsed: 2.075 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.551, system: 0.061, elapsed: 13.102 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.014, elapsed: 0.295 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.257, system: 0.438, elapsed: 6.418 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.222 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.748, system: 0.541, elapsed: 14.699 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.173, system: 1.119, elapsed: 37.762 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64