Tools for reporting and forecasting viral respiratory infections,
using case surveillance data. Report generation tools for short-term forecasts,
and validation metrics for an arbitrary number of customizable respiratory viruses.
Estimation of the effective reproduction number is based on the 'EpiEstim' framework
described in work by 'Cori' and colleagues. (2013) <doi:10.1093/aje/kwt133>.
| Version: |
1.0.3 |
| Depends: |
R (≥ 4.1.0) |
| Imports: |
data.table, dplyr, EpiEstim, ggplot2, incidence, lubridate, projections, purrr, rlang, tibble, stats, utils, tidyr, glue, mgcv, kableExtra, cowplot |
| Suggests: |
knitr, rmarkdown, testthat (≥ 3.0.0) |
| Published: |
2026-02-12 |
| DOI: |
10.32614/CRAN.package.ViroReportR (may not be active yet) |
| Author: |
Mike Irvine [aut, cre, cph],
Caesar Wong [aut],
Nirupama Tamvada [aut],
Rebeca Falcao [aut],
Nelson Tang [aut] |
| Maintainer: |
Mike Irvine <mike.irvine at bccdc.ca> |
| BugReports: |
https://github.com/BCCDC-PHSA/ViroReportR/issues |
| License: |
GPL (≥ 3) |
| URL: |
https://github.com/BCCDC-PHSA/ViroReportR |
| NeedsCompilation: |
no |
| Materials: |
README, NEWS |
| CRAN checks: |
ViroReportR results |