Clazz.declarePackage("J.renderbio");
Clazz.load(["J.renderbio.RocketsRenderer"], "J.renderbio.CartoonRenderer", ["J.api.Interface", "J.c.STR"], function(){
var c$ = Clazz.decorateAsClass(function(){
this.nucleicRenderer = null;
Clazz.instantialize(this, arguments);}, J.renderbio, "CartoonRenderer", J.renderbio.RocketsRenderer);
Clazz.overrideMethod(c$, "renderBioShape", 
function(bioShape){
if (!this.setupRR(bioShape, false)) return;
if (this.isNucleic || this.isPhosphorusOnly) {
if (this.nucleicRenderer == null) this.nucleicRenderer = J.api.Interface.getInterface("J.renderbio.NucleicRenderer", this.vwr, "render");
this.calcScreenControlPoints();
this.nucleicRenderer.renderNucleic(this);
return;
}var val = this.vwr.getBoolean(603979819);
if (this.helixRockets != val) {
bioShape.falsifyMesh();
this.helixRockets = val;
}this.ribbonTopScreens = this.calcScreens(0.5, this.mads);
this.ribbonBottomScreens = this.calcScreens(-0.5, this.mads);
this.calcRopeMidPoints();
this.renderProtein();
this.vwr.freeTempPoints(this.cordMidPoints);
this.vwr.freeTempPoints(this.ribbonTopScreens);
this.vwr.freeTempPoints(this.ribbonBottomScreens);
}, "J.shapebio.BioShape");
Clazz.defineMethod(c$, "renderProtein", 
function(){
var lastWasSheet = false;
var lastWasHelix = false;
var previousStructure = null;
var thisStructure;
var needRockets = (this.helixRockets || !this.renderArrowHeads);
var doRockets = false;
for (var i = this.monomerCount; --i >= 0; ) {
thisStructure = this.monomers[i].getStructure();
if (thisStructure !== previousStructure) {
lastWasSheet = false;
}previousStructure = thisStructure;
var isHelix = (this.structureTypes[i] === J.c.STR.HELIX);
var isSheet = (this.structureTypes[i] === J.c.STR.SHEET);
if (this.bsVisible.get(i)) {
if (isHelix && needRockets) {
doRockets = true;
} else if (isSheet || isHelix) {
if (lastWasSheet && isSheet || lastWasHelix && isHelix) {
this.renderHermiteRibbon(true, i, true);
} else {
this.renderHermiteArrowHead(i);
}} else {
this.renderHermiteConic(i, true, 7);
}}lastWasSheet = isSheet;
lastWasHelix = isHelix && !this.helixRockets;
}
if (doRockets) this.renderRockets();
});
});
;//5.0.1-v7 Mon Aug 17 10:07:10 MDT 2026
