FDR Power

Documentation for package ‘pwrFDR’ version 3.2.2

Help Pages

%,%	The paste operator
%over%	Division operator with divide by zero clobbering
arg.vals	Extracts the full argument list and call attribute.
backsolve.seFDPoalpha	Find missing argument giving required se[FDP]/alpha (or se[TPP]/average.power)
backsolve.seTPPoavgpwr	Find missing argument giving required se[FDP]/alpha (or se[TPP]/average.power)
basic.tmPrint	Wrapper to Print a Basic Nicely Formatted Table
cc.ROC	Computes the optimal number of controls per case in hypothesis tests involving the ROC. Included here with the intent that it can be used in conjunction with 'pwrFDR' to allow power/sample size calculation for multiple tests of ROC curve based hypothesis. See details.
cCDF.Rom	Computes the complimentary CDF for the significant call proportion, R_m/m.
cCDF.ToM	Computes the complimentary CDF for the true positive proportion, T_m/M_m.
cCDF.VoR	Computes the complimentary CDF for the false discovery proportion, V_m/R_m.
CDF.Pval	CDF of pooled (H0 and HA) population p-values
CDF.Pval.apsi.eq.u	Calculates the fixed point for the Romano procedure.
CDF.Pval.au.eq.u	Function which solves the implicit equation u = G( u alpha)
CDF.Pval.HA	CDF of p-values for test statistics distribted under HA.
controlFDP	Helper function for the BHFDX FDP control method
criterion	BH-FDR and Romano Criterion
detail	The detail extraction function for simulated power objects
dists	The Distribution family object
es.ROC	Computes the equivalent Z-test effect size in hypothesis tests involving the ROC. Included here with the intent that it can be used in conjunction with 'pwrFDR' to allow power/sample size calculation for multiple tests of ROC curve based hypothesis. See details.
gentempfilenm	Generate a tempfile name
if.0.rm	A helper function- remove if zero.
if.na.x	A helper function - substitute 'NA's with a specified 'x'.
if.y.z	A helper function - substitute 'y"s with a specified 'z'.
join.tbl	Combine pwrFDR Results
logit	Computes the logit transform
logitInv	Computes the inverse logit transform
nna	A helper function- turns a missing column into 'NA's inside of a with statement
paste	The paste operator
pwrFDR	Ensemble power or sample size under selected control of the FDP
pwrFDR.grid	Evaluate 'pwrFDR' on a grid.
sd.rtm.Rom	Extractor function for asymptotic sd[R_m/m] under selected FDP control method
sd.rtm.ToM	Extractor function for asymptotic sd[T_m/M_m] under selected FDP control method
sd.rtm.VoR	Extractor function for asymptotic sd[V_m/R_m] under selected FDP control method