Read and Analyze 'MetIDQ™' Software Output Files

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Documentation for package ‘MetAlyzer’ version 1.1.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

aggregatedData	Get Aggregated Data
calculate_anova	One-way ANOVA
calculate_cv	Add mean, SD and CV
calculate_log2FC	Calculate log2 fold change
example_extraction_data	Get example extraction data
example_meta_data	Get example meta data
example_mutation_data_xl	Get example mutation data
exportConcValues	Export filtered raw data as csv
filterMetabolites	Filter metabolites
filterMetaData	Filter meta data
log2FC	Get log2FC Data
metalyzer_colors	Get MetAlyzer colors
MetAlyzer_dataset	Open file and read data
pathway	Get pathway file path
plotly_network	Plotly Log2FC Network Plot
plotly_scatter	Plotly Log2FC Scatter Plot
plotly_vulcano	Plotly Log2FC Vulcano Plot
plot_log2FC	Plot log2 fold change
plot_network	Plot Pathway Network
polarity	Get polarity file path
read_named_region	Read Named Regions
renameMetaData	Rename meta data
summarizeConcValues	Summarize concentration values
summarizeQuantData	Summarize quantification status
updateMetaData	Update meta data