CRAN Package Check Results for Package cmmr

Last updated on 2024-06-18 12:55:49 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.2 2.22 25.89 28.11 NOTE
r-devel-linux-x86_64-debian-gcc 0.1.2 1.89 20.05 21.94 NOTE
r-devel-linux-x86_64-fedora-clang 0.1.2 35.15 NOTE
r-devel-linux-x86_64-fedora-gcc 0.1.2 35.01 NOTE
r-devel-windows-x86_64 0.1.2 3.00 45.00 48.00 NOTE
r-patched-linux-x86_64 0.1.2 2.70 25.28 27.98 NOTE
r-release-linux-x86_64 0.1.2 2.09 24.77 26.86 NOTE
r-release-macos-arm64 0.1.2 24.00 NOTE
r-release-macos-x86_64 0.1.2 34.00 ERROR
r-release-windows-x86_64 0.1.2 4.00 45.00 49.00 NOTE
r-oldrel-macos-arm64 0.1.2 24.00 NOTE
r-oldrel-macos-x86_64 0.1.2 28.00 NOTE
r-oldrel-windows-x86_64 0.1.2 4.00 47.00 51.00 NOTE

Check Details

Version: 0.1.2
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.1.2
Check: examples
Result: ERROR Running examples in ‘cmmr-Ex.R’ failed The error most likely occurred in: > ### Name: advanced_batch_search > ### Title: Encapsulation of CEU Mass Mediator advanced batch search API. > ### Aliases: advanced_batch_search > > ### ** Examples > > df <- advanced_batch_search( + cmm_url = paste0( + 'http://ceumass.eps.uspceu.es/mediator/api/v3/', + 'advancedbatch'), + chemical_alphabet = 'all', + modifiers_type = 'none', + metabolites_type = 'all-except-peptides', + databases = '["hmdb"]', + masses_mode = 'mz', + ion_mode = 'positive', + adducts = '["all"]', + deuterium = 'false', + tolerance = '7.5', + tolerance_mode = 'ppm', + masses = '[400.3432, 288.2174]', + all_masses = '[]', + retention_times = '[18.842525, 4.021555]', + all_retention_times = '[]', + composite_spectra = paste0( + '[[{ "mz": 400.3432, "intensity": 307034.88 }, ', + '{ "mz": 311.20145, "intensity": 400.03336 }]]' + )) Using the CEU Mass Mediator server API. Error in curl::curl_fetch_memory(url, handle = handle) : Timeout was reached: [ceumass.eps.uspceu.es] Resolving timed out after 10007 milliseconds Calls: advanced_batch_search ... request_fetch -> request_fetch.write_memory -> <Anonymous> Execution halted Flavor: r-release-macos-x86_64