CRAN Package Check Results for Maintainer ‘Henrik Bengtsson <henrikb at braju.com>’

Last updated on 2026-04-25 00:50:23 CEST.

Package ERROR NOTE OK
ACNE 12
aroma.affymetrix 12
aroma.apd 12
aroma.cn 12
aroma.core 1 11
calmate 2 10
dChipIO 12
doFuture 12
future 12
future.apply 12
future.batchtools 4 8
future.callr 12
future.mirai 12
future.tests 12
futureverse 12
futurize 12
globals 12
listenv 12
matrixStats 12
parallelly 12
port4me 12
profmem 12
progressify 12
progressr 12
PSCBS 12
R.cache 12
R.devices 4 8
R.filesets 12
R.huge 12
R.matlab 12
R.methodsS3 2 10
R.oo 12
R.rsp 12
R.utils 12
seguid 12
startup 12
TopDom 12

Package ACNE

Current CRAN status: OK: 12

Package aroma.affymetrix

Current CRAN status: OK: 12

Package aroma.apd

Current CRAN status: OK: 12

Package aroma.cn

Current CRAN status: OK: 12

Package aroma.core

Current CRAN status: NOTE: 1, OK: 11

Version: 3.3.2
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Henrik Bengtsson <henrikb@braju.com>’ Additional repositories with no packages: https://r-forge.r-project.org Flavor: r-devel-linux-x86_64-debian-gcc

Package calmate

Current CRAN status: NOTE: 2, OK: 10

Version: 0.13.0
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Henrik Bengtsson <henrikb@braju.com>’ Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package dChipIO

Current CRAN status: OK: 12

Package doFuture

Current CRAN status: OK: 12

Package future

Current CRAN status: OK: 12

Package future.apply

Current CRAN status: OK: 12

Package future.batchtools

Current CRAN status: ERROR: 4, OK: 8

Version: 0.21.0
Check: tests
Result: ERROR Running ‘test-BatchtoolsFuture,gc.R’ [5s/6s] Running ‘test-BatchtoolsFuture.R’ [6s/9s] Running ‘test-BatchtoolsFutureError.R’ [7s/9s] Running ‘test-batchtools_bash.R’ [1s/2s] Running ‘test-batchtools_custom.R’ [11s/14s] Running ‘test-batchtools_hpc.R’ [1s/2s] Running ‘test-batchtools_interactive.R’ [3s/4s] Running ‘test-batchtools_local.R’ [9s/12s] Running ‘test-batchtools_multicore.R’ [1s/2s] Running ‘test-batchtools_ssh.R’ [3s/5s] Running ‘test-batchtools_template.R’ [1s/2s] Running ‘test-demo.R’ [9s/13s] Running ‘test-dotdotdot.R’ [8s/13s] Running ‘test-future,labels.R’ [8s/12s] Running ‘test-future,lazy.R’ [5s/7s] Running ‘test-globals,formulas.R’ [20s/29s] Running ‘test-globals,manual.R’ [8s/12s] Running ‘test-globals,subassignment.R’ [15s/22s] Running ‘test-globals,tricky.R’ [17s/23s] Running ‘test-nbrOfWorkers.R’ [1s/2s] Running ‘test-plan.R’ [6s/8s] Running ‘test-resources_OP.R’ [3s/4s] Running ‘test-rng.R’ [17s/24s] Running ‘test-stdout.R’ [12s/17s] Running ‘test-utils.R’ [1s/2s] Running ‘test-zzz,future_lapply.R’ [30s/41s] Running ‘test-zzz.onUnload.R’ [1s/2s] Running the tests in ‘tests/test-globals,manual.R’ failed. Complete output: > ## This runs testme test script inst/testme/test-globals,manual.R > ## Don't edit - it was autogenerated by inst/testme/deploy.R > future.batchtools:::testme("globals,manual") Test 'globals,manual' ... Sourcing 9 prologue scripts ... 01/09 prologue script '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/future.batchtools/testme/_prologue/001.load.R' 02/09 prologue script '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/future.batchtools/testme/_prologue/002.record-state.R' 03/09 prologue script '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/future.batchtools/testme/_prologue/030.imports.R' 04/09 prologue script '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/future.batchtools/testme/_prologue/050.utils.R' 05/09 prologue script '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/future.batchtools/testme/_prologue/090.context.R' 06/09 prologue script '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/future.batchtools/testme/_prologue/090.options.R' 07/09 prologue script '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/future.batchtools/testme/_prologue/091.envvars.R' 08/09 prologue script '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/future.batchtools/testme/_prologue/099.future-setup.R' 09/09 prologue script '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/future.batchtools/testme/_prologue/995.detrius-connections.R' Sourcing 9 prologue scripts ... done Running test script: '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/future.batchtools/testme/test-globals,manual.R' > library(future) > plan(future.batchtools::batchtools_local) > message("*** Globals - manually ...") *** Globals - manually ... > message("*** Globals manually specified as named list ...") *** Globals manually specified as named list ... > globals <- list(a = 1, b = 2, sumtwo = function(x) x[1] + + x[2]) > attach_locally(globals) > v0 <- local({ + x <- 1:10 + sumtwo(a + b * x) + }) > message("*** Globals - automatic ...") *** Globals - automatic ... > attach_locally(globals) > f <- future({ + x <- 1:10 + sumtwo(a + b * x) + }, globals = TRUE) > rm(list = names(globals)) > y <- value(f) > print(y) [1] 8 > stopifnot(all.equal(y, v0)) > attach_locally(globals) > y %<-% { + x <- 1:10 + sumtwo(a + b * x) + } %globals% TRUE > rm(list = names(globals)) > print(y) [1] 8 > stopifnot(all.equal(y, v0)) > y %<-% { + 1 + } %globals% FALSE > print(y) [1] 1 > stopifnot(identical(y, 1)) > attach_locally(globals) > f <- future({ + x <- 1:10 + sumtwo(a + b * x) + }, globals = FALSE) > rm(list = names(globals)) > y <- tryCatch(value(f), error = identity) Warning in delete.BatchtoolsFuture(future) : Will not remove batchtools registry, because the status of the batchtools was 'error', 'defined', 'finished', 'started', 'submitted' and future backend argument 'delete' is 'on-success': '/home/hornik/tmp/scratch/RtmpmNM1IJ/.future/20260424_023528-mNM1IJ/batchtools_1577297635' > if (!inherits(f, c("SequentialFuture", "MulticoreFuture"))) { + stopifnot(inherits(y, "simpleError")) + } Error: inherits(y, "simpleError") is not TRUE Execution halted Warning in delete.BatchtoolsFuture(f, onRunning = "skip", onMissing = "ignore", : Will not remove batchtools registry, because the status of the batchtools was 'error', 'defined', 'finished', 'started', 'submitted' and future backend argument 'delete' is 'on-success': '/home/hornik/tmp/scratch/RtmpmNM1IJ/.future/20260424_023528-mNM1IJ/batchtools_1577297635' Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.21.0
Check: tests
Result: ERROR Running ‘test-BatchtoolsFuture,gc.R’ [3s/5s] Running ‘test-BatchtoolsFuture.R’ [4s/6s] Running ‘test-BatchtoolsFutureError.R’ [5s/7s] Running ‘test-batchtools_bash.R’ [1s/1s] Running ‘test-batchtools_custom.R’ [8s/11s] Running ‘test-batchtools_hpc.R’ [1s/1s] Running ‘test-batchtools_interactive.R’ [2s/2s] Running ‘test-batchtools_local.R’ [7s/9s] Running ‘test-batchtools_multicore.R’ [1s/1s] Running ‘test-batchtools_ssh.R’ [3s/5s] Running ‘test-batchtools_template.R’ [1s/1s] Running ‘test-demo.R’ [6s/8s] Running ‘test-dotdotdot.R’ [7s/10s] Running ‘test-future,labels.R’ [5s/7s] Running ‘test-future,lazy.R’ [3s/4s] Running ‘test-globals,formulas.R’ [15s/21s] Running ‘test-globals,manual.R’ [6s/8s] Running ‘test-globals,subassignment.R’ [11s/14s] Running ‘test-globals,tricky.R’ [12s/16s] Running ‘test-nbrOfWorkers.R’ [1s/1s] Running ‘test-plan.R’ [4s/5s] Running ‘test-resources_OP.R’ [2s/3s] Running ‘test-rng.R’ [12s/16s] Running ‘test-stdout.R’ [8s/10s] Running ‘test-utils.R’ [1s/1s] Running ‘test-zzz,future_lapply.R’ [21s/26s] Running ‘test-zzz.onUnload.R’ [1s/1s] Running the tests in ‘tests/test-globals,manual.R’ failed. Complete output: > ## This runs testme test script inst/testme/test-globals,manual.R > ## Don't edit - it was autogenerated by inst/testme/deploy.R > future.batchtools:::testme("globals,manual") Test 'globals,manual' ... Sourcing 9 prologue scripts ... 01/09 prologue script '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/future.batchtools/testme/_prologue/001.load.R' 02/09 prologue script '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/future.batchtools/testme/_prologue/002.record-state.R' 03/09 prologue script '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/future.batchtools/testme/_prologue/030.imports.R' 04/09 prologue script '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/future.batchtools/testme/_prologue/050.utils.R' 05/09 prologue script '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/future.batchtools/testme/_prologue/090.context.R' 06/09 prologue script '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/future.batchtools/testme/_prologue/090.options.R' 07/09 prologue script '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/future.batchtools/testme/_prologue/091.envvars.R' 08/09 prologue script '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/future.batchtools/testme/_prologue/099.future-setup.R' 09/09 prologue script '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/future.batchtools/testme/_prologue/995.detrius-connections.R' Sourcing 9 prologue scripts ... done Running test script: '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/future.batchtools/testme/test-globals,manual.R' > library(future) > plan(future.batchtools::batchtools_local) > message("*** Globals - manually ...") *** Globals - manually ... > message("*** Globals manually specified as named list ...") *** Globals manually specified as named list ... > globals <- list(a = 1, b = 2, sumtwo = function(x) x[1] + + x[2]) > attach_locally(globals) > v0 <- local({ + x <- 1:10 + sumtwo(a + b * x) + }) > message("*** Globals - automatic ...") *** Globals - automatic ... > attach_locally(globals) > f <- future({ + x <- 1:10 + sumtwo(a + b * x) + }, globals = TRUE) > rm(list = names(globals)) > y <- value(f) > print(y) [1] 8 > stopifnot(all.equal(y, v0)) > attach_locally(globals) > y %<-% { + x <- 1:10 + sumtwo(a + b * x) + } %globals% TRUE > rm(list = names(globals)) > print(y) [1] 8 > stopifnot(all.equal(y, v0)) > y %<-% { + 1 + } %globals% FALSE > print(y) [1] 1 > stopifnot(identical(y, 1)) > attach_locally(globals) > f <- future({ + x <- 1:10 + sumtwo(a + b * x) + }, globals = FALSE) > rm(list = names(globals)) > y <- tryCatch(value(f), error = identity) Warning in delete.BatchtoolsFuture(future) : Will not remove batchtools registry, because the status of the batchtools was 'error', 'defined', 'finished', 'started', 'submitted' and future backend argument 'delete' is 'on-success': '/tmp/RtmpuhFKBc/.future/20260424_163708-uhFKBc/batchtools_1344562877' > if (!inherits(f, c("SequentialFuture", "MulticoreFuture"))) { + stopifnot(inherits(y, "simpleError")) + } Error: inherits(y, "simpleError") is not TRUE Execution halted Warning in delete.BatchtoolsFuture(f, onRunning = "skip", onMissing = "ignore", : Will not remove batchtools registry, because the status of the batchtools was 'error', 'defined', 'finished', 'started', 'submitted' and future backend argument 'delete' is 'on-success': '/tmp/RtmpuhFKBc/.future/20260424_163708-uhFKBc/batchtools_1344562877' Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.21.0
Check: tests
Result: ERROR Running ‘test-BatchtoolsFuture,gc.R’ [8s/11s] Running ‘test-BatchtoolsFuture.R’ [9s/13s] Running ‘test-BatchtoolsFutureError.R’ [10s/12s] Running ‘test-batchtools_bash.R’ Running ‘test-batchtools_custom.R’ [17s/24s] Running ‘test-batchtools_hpc.R’ Running ‘test-batchtools_interactive.R’ Running ‘test-batchtools_local.R’ [14s/15s] Running ‘test-batchtools_multicore.R’ Running ‘test-batchtools_ssh.R’ Running ‘test-batchtools_template.R’ Running ‘test-demo.R’ [12s/14s] Running ‘test-dotdotdot.R’ [15s/20s] Running ‘test-future,labels.R’ [12s/13s] Running ‘test-future,lazy.R’ Running ‘test-globals,formulas.R’ [31s/34s] Running ‘test-globals,manual.R’ [13s/13s] Running ‘test-globals,subassignment.R’ [21s/23s] Running ‘test-globals,tricky.R’ [27s/28s] Running ‘test-nbrOfWorkers.R’ Running ‘test-plan.R’ Running ‘test-resources_OP.R’ Running ‘test-rng.R’ [26s/28s] Running ‘test-stdout.R’ [18s/19s] Running ‘test-utils.R’ Running ‘test-zzz,future_lapply.R’ [46s/50s] Running ‘test-zzz.onUnload.R’ Running the tests in ‘tests/test-globals,manual.R’ failed. Complete output: > ## This runs testme test script inst/testme/test-globals,manual.R > ## Don't edit - it was autogenerated by inst/testme/deploy.R > future.batchtools:::testme("globals,manual") Test 'globals,manual' ... Sourcing 9 prologue scripts ... 01/09 prologue script '/data/gannet/ripley/R/packages/tests-clang/future.batchtools.Rcheck/future.batchtools/testme/_prologue/001.load.R' 02/09 prologue script '/data/gannet/ripley/R/packages/tests-clang/future.batchtools.Rcheck/future.batchtools/testme/_prologue/002.record-state.R' 03/09 prologue script '/data/gannet/ripley/R/packages/tests-clang/future.batchtools.Rcheck/future.batchtools/testme/_prologue/030.imports.R' 04/09 prologue script '/data/gannet/ripley/R/packages/tests-clang/future.batchtools.Rcheck/future.batchtools/testme/_prologue/050.utils.R' 05/09 prologue script '/data/gannet/ripley/R/packages/tests-clang/future.batchtools.Rcheck/future.batchtools/testme/_prologue/090.context.R' 06/09 prologue script '/data/gannet/ripley/R/packages/tests-clang/future.batchtools.Rcheck/future.batchtools/testme/_prologue/090.options.R' 07/09 prologue script '/data/gannet/ripley/R/packages/tests-clang/future.batchtools.Rcheck/future.batchtools/testme/_prologue/091.envvars.R' 08/09 prologue script '/data/gannet/ripley/R/packages/tests-clang/future.batchtools.Rcheck/future.batchtools/testme/_prologue/099.future-setup.R' 09/09 prologue script '/data/gannet/ripley/R/packages/tests-clang/future.batchtools.Rcheck/future.batchtools/testme/_prologue/995.detrius-connections.R' Sourcing 9 prologue scripts ... done Running test script: '/data/gannet/ripley/R/packages/tests-clang/future.batchtools.Rcheck/future.batchtools/testme/test-globals,manual.R' > library(future) > plan(future.batchtools::batchtools_local) > message("*** Globals - manually ...") *** Globals - manually ... > message("*** Globals manually specified as named list ...") *** Globals manually specified as named list ... > globals <- list(a = 1, b = 2, sumtwo = function(x) x[1] + + x[2]) > attach_locally(globals) > v0 <- local({ + x <- 1:10 + sumtwo(a + b * x) + }) > message("*** Globals - automatic ...") *** Globals - automatic ... > attach_locally(globals) > f <- future({ + x <- 1:10 + sumtwo(a + b * x) + }, globals = TRUE) > rm(list = names(globals)) > y <- value(f) > print(y) [1] 8 > stopifnot(all.equal(y, v0)) > attach_locally(globals) > y %<-% { + x <- 1:10 + sumtwo(a + b * x) + } %globals% TRUE > rm(list = names(globals)) > print(y) [1] 8 > stopifnot(all.equal(y, v0)) > y %<-% { + 1 + } %globals% FALSE > print(y) [1] 1 > stopifnot(identical(y, 1)) > attach_locally(globals) > f <- future({ + x <- 1:10 + sumtwo(a + b * x) + }, globals = FALSE) > rm(list = names(globals)) > y <- tryCatch(value(f), error = identity) Warning in delete.BatchtoolsFuture(future) : Will not remove batchtools registry, because the status of the batchtools was 'error', 'defined', 'finished', 'started', 'submitted' and future backend argument 'delete' is 'on-success': '/tmp/RtmphkF0WX/working_dir/RtmpnbrLA8/.future/20260423_101433-nbrLA8/batchtools_1641249398' > if (!inherits(f, c("SequentialFuture", "MulticoreFuture"))) { + stopifnot(inherits(y, "simpleError")) + } Error: inherits(y, "simpleError") is not TRUE Execution halted Warning in delete.BatchtoolsFuture(f, onRunning = "skip", onMissing = "ignore", : Will not remove batchtools registry, because the status of the batchtools was 'error', 'defined', 'finished', 'started', 'submitted' and future backend argument 'delete' is 'on-success': '/tmp/RtmphkF0WX/working_dir/RtmpnbrLA8/.future/20260423_101433-nbrLA8/batchtools_1641249398' Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.21.0
Check: tests
Result: ERROR Running ‘test-BatchtoolsFuture,gc.R’ [8s/11s] Running ‘test-BatchtoolsFuture.R’ [10s/12s] Running ‘test-BatchtoolsFutureError.R’ [11s/13s] Running ‘test-batchtools_bash.R’ Running ‘test-batchtools_custom.R’ [18s/24s] Running ‘test-batchtools_hpc.R’ Running ‘test-batchtools_interactive.R’ Running ‘test-batchtools_local.R’ [16s/20s] Running ‘test-batchtools_multicore.R’ Running ‘test-batchtools_ssh.R’ Running ‘test-batchtools_template.R’ Running ‘test-demo.R’ [14s/18s] Running ‘test-dotdotdot.R’ [15s/18s] Running ‘test-future,labels.R’ [13s/19s] Running ‘test-future,lazy.R’ [8s/11s] Running ‘test-globals,formulas.R’ [33s/48s] Running ‘test-globals,manual.R’ [14s/18s] Running ‘test-globals,subassignment.R’ [24s/33s] Running ‘test-globals,tricky.R’ [28s/38s] Running ‘test-nbrOfWorkers.R’ Running ‘test-plan.R’ [9s/11s] Running ‘test-resources_OP.R’ Running ‘test-rng.R’ [29s/33s] Running ‘test-stdout.R’ [19s/21s] Running ‘test-utils.R’ Running ‘test-zzz,future_lapply.R’ [48s/56s] Running ‘test-zzz.onUnload.R’ Running the tests in ‘tests/test-globals,manual.R’ failed. Complete output: > ## This runs testme test script inst/testme/test-globals,manual.R > ## Don't edit - it was autogenerated by inst/testme/deploy.R > future.batchtools:::testme("globals,manual") Test 'globals,manual' ... Sourcing 9 prologue scripts ... 01/09 prologue script '/data/gannet/ripley/R/packages/tests-devel/future.batchtools.Rcheck/future.batchtools/testme/_prologue/001.load.R' 02/09 prologue script '/data/gannet/ripley/R/packages/tests-devel/future.batchtools.Rcheck/future.batchtools/testme/_prologue/002.record-state.R' 03/09 prologue script '/data/gannet/ripley/R/packages/tests-devel/future.batchtools.Rcheck/future.batchtools/testme/_prologue/030.imports.R' 04/09 prologue script '/data/gannet/ripley/R/packages/tests-devel/future.batchtools.Rcheck/future.batchtools/testme/_prologue/050.utils.R' 05/09 prologue script '/data/gannet/ripley/R/packages/tests-devel/future.batchtools.Rcheck/future.batchtools/testme/_prologue/090.context.R' 06/09 prologue script '/data/gannet/ripley/R/packages/tests-devel/future.batchtools.Rcheck/future.batchtools/testme/_prologue/090.options.R' 07/09 prologue script '/data/gannet/ripley/R/packages/tests-devel/future.batchtools.Rcheck/future.batchtools/testme/_prologue/091.envvars.R' 08/09 prologue script '/data/gannet/ripley/R/packages/tests-devel/future.batchtools.Rcheck/future.batchtools/testme/_prologue/099.future-setup.R' 09/09 prologue script '/data/gannet/ripley/R/packages/tests-devel/future.batchtools.Rcheck/future.batchtools/testme/_prologue/995.detrius-connections.R' Sourcing 9 prologue scripts ... done Running test script: '/data/gannet/ripley/R/packages/tests-devel/future.batchtools.Rcheck/future.batchtools/testme/test-globals,manual.R' > library(future) > plan(future.batchtools::batchtools_local) > message("*** Globals - manually ...") *** Globals - manually ... > message("*** Globals manually specified as named list ...") *** Globals manually specified as named list ... > globals <- list(a = 1, b = 2, sumtwo = function(x) x[1] + + x[2]) > attach_locally(globals) > v0 <- local({ + x <- 1:10 + sumtwo(a + b * x) + }) > message("*** Globals - automatic ...") *** Globals - automatic ... > attach_locally(globals) > f <- future({ + x <- 1:10 + sumtwo(a + b * x) + }, globals = TRUE) > rm(list = names(globals)) > y <- value(f) > print(y) [1] 8 > stopifnot(all.equal(y, v0)) > attach_locally(globals) > y %<-% { + x <- 1:10 + sumtwo(a + b * x) + } %globals% TRUE > rm(list = names(globals)) > print(y) [1] 8 > stopifnot(all.equal(y, v0)) > y %<-% { + 1 + } %globals% FALSE > print(y) [1] 1 > stopifnot(identical(y, 1)) > attach_locally(globals) > f <- future({ + x <- 1:10 + sumtwo(a + b * x) + }, globals = FALSE) > rm(list = names(globals)) > y <- tryCatch(value(f), error = identity) Warning in delete.BatchtoolsFuture(future) : Will not remove batchtools registry, because the status of the batchtools was 'error', 'defined', 'finished', 'started', 'submitted' and future backend argument 'delete' is 'on-success': '/tmp/RtmpLH7c4o/working_dir/Rtmpnyw07N/.future/20260423_095612-nyw07N/batchtools_1181944045' > if (!inherits(f, c("SequentialFuture", "MulticoreFuture"))) { + stopifnot(inherits(y, "simpleError")) + } Error: inherits(y, "simpleError") is not TRUE Execution halted Warning in delete.BatchtoolsFuture(f, onRunning = "skip", onMissing = "ignore", : Will not remove batchtools registry, because the status of the batchtools was 'error', 'defined', 'finished', 'started', 'submitted' and future backend argument 'delete' is 'on-success': '/tmp/RtmpLH7c4o/working_dir/Rtmpnyw07N/.future/20260423_095612-nyw07N/batchtools_1181944045' Flavor: r-devel-linux-x86_64-fedora-gcc

Package future.callr

Current CRAN status: OK: 12

Package future.mirai

Current CRAN status: OK: 12

Package future.tests

Current CRAN status: OK: 12

Package futureverse

Current CRAN status: OK: 12

Package futurize

Current CRAN status: OK: 12

Package globals

Current CRAN status: OK: 12

Package listenv

Current CRAN status: OK: 12

Package matrixStats

Current CRAN status: OK: 12

Package parallelly

Current CRAN status: OK: 12

Package port4me

Current CRAN status: OK: 12

Package profmem

Current CRAN status: OK: 12

Package progressify

Current CRAN status: OK: 12

Package progressr

Current CRAN status: OK: 12

Package PSCBS

Current CRAN status: OK: 12

Package R.cache

Current CRAN status: OK: 12

Package R.devices

Current CRAN status: ERROR: 4, OK: 8

Version: 2.17.3
Check: tests
Result: ERROR Running ‘DevEvalFileProduct.R’ [1s/1s] Running ‘DevEvalProduct.R’ [1s/1s] Running ‘capabilitiesX11.R’ [1s/2s] Running ‘capturePlot.R’ [1s/1s] Running ‘dataURI.R’ [1s/1s] Running ‘devAll.R’ [1s/1s] Running ‘devDump.R’ [0s/1s] Running ‘devEqualTypes.R’ [1s/1s] Running ‘devEval,error.R’ [1s/1s] Running ‘devEval.R’ [2s/5s] Running ‘devIsInteractive.R’ [1s/1s] Running ‘devIsOpen.R’ [1s/1s] Running ‘devList.R’ [1s/1s] Running ‘devListIndexOf.R’ [1s/1s] Running ‘devNew.R’ [1s/1s] Running ‘devOptions.R’ [2s/2s] Running ‘devSet.R’ [1s/1s] Running ‘devTypeName.R’ [1s/1s] Running ‘favicon.R’ [1s/1s] Running ‘toNNN.R’ [1s/2s] Running ‘withPar.R’ [1s/1s] Running the tests in ‘tests/DevEvalProduct.R’ failed. Complete output: > view <- R.devices:::view > > message("*** DevEvalProduct ...") *** DevEvalProduct ... > > message("*** DevEvalProduct - subsetting ...") *** DevEvalProduct - subsetting ... > > p <- R.devices:::DevEvalProduct("foo", tags=c("a", "b")) > for (ff in c("fullname", "name", "tags")) { + cat(sprintf("%s: %s\n", ff, substring(p[[ff]], 1, 50))) + } fullname: foo,a,b name: foo tags: a,b > > library("R.devices") R.devices v2.17.3 (2025-12-18 06:11:04 UTC) successfully loaded. See ?R.devices for help. > > p <- DevEvalProduct("foo", tags=c("a", "b")) > for (ff in c("fullname", "name", "tags")) { + cat(sprintf("%s: %s\n", ff, substring(p[[ff]], 1, 50))) + } fullname: foo,a,b name: foo tags: a,b > > p <- DevEvalProduct("foo", tags=c("a", "b")) > valueA <- p[["name"]] > valueB <- p$name > stopifnot(identical(valueB, valueA)) > value <- p[["non-existing-field"]] > stopifnot(is.null(value)) Error: is.null(value) is not TRUE Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 2.17.3
Check: tests
Result: ERROR Running ‘DevEvalFileProduct.R’ [0s/1s] Running ‘DevEvalProduct.R’ [0s/1s] Running ‘capabilitiesX11.R’ [1s/1s] Running ‘capturePlot.R’ [1s/1s] Running ‘dataURI.R’ [0s/1s] Running ‘devAll.R’ [0s/1s] Running ‘devDump.R’ [0s/1s] Running ‘devEqualTypes.R’ [0s/1s] Running ‘devEval,error.R’ [1s/1s] Running ‘devEval.R’ [2s/3s] Running ‘devIsInteractive.R’ [0s/1s] Running ‘devIsOpen.R’ [0s/1s] Running ‘devList.R’ [0s/0s] Running ‘devListIndexOf.R’ [0s/1s] Running ‘devNew.R’ [1s/1s] Running ‘devOptions.R’ [1s/1s] Running ‘devSet.R’ [1s/1s] Running ‘devTypeName.R’ [0s/1s] Running ‘favicon.R’ [0s/1s] Running ‘toNNN.R’ [1s/1s] Running ‘withPar.R’ [0s/1s] Running the tests in ‘tests/DevEvalProduct.R’ failed. Complete output: > view <- R.devices:::view > > message("*** DevEvalProduct ...") *** DevEvalProduct ... > > message("*** DevEvalProduct - subsetting ...") *** DevEvalProduct - subsetting ... > > p <- R.devices:::DevEvalProduct("foo", tags=c("a", "b")) > for (ff in c("fullname", "name", "tags")) { + cat(sprintf("%s: %s\n", ff, substring(p[[ff]], 1, 50))) + } fullname: foo,a,b name: foo tags: a,b > > library("R.devices") R.devices v2.17.3 (2025-12-18 06:11:04 UTC) successfully loaded. See ?R.devices for help. > > p <- DevEvalProduct("foo", tags=c("a", "b")) > for (ff in c("fullname", "name", "tags")) { + cat(sprintf("%s: %s\n", ff, substring(p[[ff]], 1, 50))) + } fullname: foo,a,b name: foo tags: a,b > > p <- DevEvalProduct("foo", tags=c("a", "b")) > valueA <- p[["name"]] > valueB <- p$name > stopifnot(identical(valueB, valueA)) > value <- p[["non-existing-field"]] > stopifnot(is.null(value)) Error: is.null(value) is not TRUE Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2.17.3
Check: tests
Result: ERROR Running ‘DevEvalFileProduct.R’ Running ‘DevEvalProduct.R’ Running ‘capabilitiesX11.R’ Running ‘capturePlot.R’ Running ‘dataURI.R’ Running ‘devAll.R’ Running ‘devDump.R’ Running ‘devEqualTypes.R’ Running ‘devEval,error.R’ Running ‘devEval.R’ Running ‘devIsInteractive.R’ Running ‘devIsOpen.R’ Running ‘devList.R’ Running ‘devListIndexOf.R’ Running ‘devNew.R’ Running ‘devOptions.R’ Running ‘devSet.R’ Running ‘devTypeName.R’ Running ‘favicon.R’ Running ‘toNNN.R’ Running ‘withPar.R’ Running the tests in ‘tests/DevEvalProduct.R’ failed. Complete output: > view <- R.devices:::view > > message("*** DevEvalProduct ...") *** DevEvalProduct ... > > message("*** DevEvalProduct - subsetting ...") *** DevEvalProduct - subsetting ... > > p <- R.devices:::DevEvalProduct("foo", tags=c("a", "b")) > for (ff in c("fullname", "name", "tags")) { + cat(sprintf("%s: %s\n", ff, substring(p[[ff]], 1, 50))) + } fullname: foo,a,b name: foo tags: a,b > > library("R.devices") R.devices v2.17.3 (2025-12-18 06:11:04 UTC) successfully loaded. See ?R.devices for help. > > p <- DevEvalProduct("foo", tags=c("a", "b")) > for (ff in c("fullname", "name", "tags")) { + cat(sprintf("%s: %s\n", ff, substring(p[[ff]], 1, 50))) + } fullname: foo,a,b name: foo tags: a,b > > p <- DevEvalProduct("foo", tags=c("a", "b")) > valueA <- p[["name"]] > valueB <- p$name > stopifnot(identical(valueB, valueA)) > value <- p[["non-existing-field"]] > stopifnot(is.null(value)) Error: is.null(value) is not TRUE Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package R.filesets

Current CRAN status: OK: 12

Package R.huge

Current CRAN status: OK: 12

Package R.matlab

Current CRAN status: NOTE: 12

Version: 3.7.0
Check: Rd files
Result: NOTE checkRd: (-1) setOption.Matlab.Rd:37-39: Lost braces in \itemize; meant \describe ? checkRd: (-1) setOption.Matlab.Rd:40-41: Lost braces in \itemize; meant \describe ? Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package R.methodsS3

Current CRAN status: NOTE: 2, OK: 10

Version: 1.8.2
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Henrik Bengtsson <henrikb@braju.com>’ Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package R.oo

Current CRAN status: OK: 12

Package R.rsp

Current CRAN status: OK: 12

Package R.utils

Current CRAN status: OK: 12

Package seguid

Current CRAN status: OK: 12

Package startup

Current CRAN status: OK: 12

Package TopDom

Current CRAN status: NOTE: 12

Version: 0.10.1
Check: CRAN incoming feasibility
Result: NOTE Maintainer: ‘Henrik Bengtsson <henrikb@braju.com>’ Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.10.1
Check: Rd files
Result: NOTE checkRd: (-1) TopDom.Rd:21: Lost braces; missing escapes or markup? 21 | Recommended range is in {5, ..., 20}.} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64