Last updated on 2026-10-24 01:51:46 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.1 | 23.29 | 105.69 | 128.98 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.1 | 18.74 | 74.03 | 92.77 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.1 | 22.00 | 93.68 | 115.68 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.1 | 20.00 | 69.11 | 89.11 | OK | |
| r-devel-windows-x86_64 | 0.1.1 | 33.00 | 187.00 | 220.00 | OK | |
| r-patched-linux-x86_64 | 0.1.1 | 25.71 | 85.93 | 111.64 | OK | |
| r-release-linux-x86_64 | 0.1.1 | 26.48 | 87.77 | 114.25 | OK | |
| r-release-macos-arm64 | 0.1.1 | 6.00 | 25.00 | 31.00 | OK | |
| r-release-macos-x86_64 | 0.1.1 | 16.00 | 108.00 | 124.00 | OK | |
| r-release-windows-x86_64 | 0.1.1 | 31.00 | 118.00 | 149.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.1 | 5.00 | 24.00 | 29.00 | OK | |
| r-oldrel-macos-x86_64 | 0.1.1 | 19.00 | 172.00 | 191.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.1 | 39.00 | 148.00 | 187.00 | OK |
Version: 0.1.1
Check: examples
Result: ERROR
Running examples in ‘simevent-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: simEventCox
> ### Title: Simulate Event History Data Based on Cox Models
> ### Aliases: simEventCox
>
> ### ** Examples
>
> # The observed data
> data_obs <- simDisease(N = 1000)
> data_obs <- IntFormatData(data_obs, N_cols = 6)
>
> # Fit Cox models
> cox_death <- survival::coxph(survival::Surv(tstart, tstop, Delta == 1)
+ ~ L0 + A0 + L, data = data_obs)
> cox_Disease <- survival::coxph(survival::Surv(tstart, tstop, Delta == 2)
+ ~ L0 + A0, data = data_obs[L == 0])
>
> # Then simulate new data:
> cox_fits <- list("D" = cox_death, "L" = cox_Disease)
> list_old_vars <- list("L0" = data_obs$L0, "A0" = data_obs$A0)
> new_data <- simEventCox(100, cox_fits = cox_fits, list_old_vars = list_old_vars)
Error in a$specials[[i]] : subscript out of bounds
Calls: simEventCox ... survfit.coxph -> model.matrix.coxph -> delete.response -> off
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [10s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(simevent)
>
> test_check("simevent")
Saving _problems/test-simEventCox-20.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 114 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-simEventCox.R:19:3'): simEventCox simulates data in the right way ──
<subscriptOutOfBoundsError/error/condition>
Error in `a$specials[[i]]`: subscript out of bounds
Backtrace:
▆
1. └─simevent::simEventCox(...) at test-simEventCox.R:19:3
2. └─base::lapply(cox_fits, function(model) basehaz(model, centered = FALSE))
3. └─simevent (local) FUN(X[[i]], ...)
4. └─survival::basehaz(model, centered = FALSE)
5. ├─survival::survfit(fit, se.fit = FALSE)
6. └─survival:::survfit.coxph(fit, se.fit = FALSE)
7. └─survival:::model.matrix.coxph(object, data = mf)
8. └─stats::delete.response(object$terms)
9. └─stats (local) off(a$specials[[i]])
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 114 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc