2c9d63437a7aad8620d2b4015fa89a72 *DESCRIPTION
236a321110281ab515e8f6f6183f04de *LICENSE
0ab4b5909f8c7319e5cb11bd15931682 *NAMESPACE
1553b5f902b1993321c71bb858594a0e *R/GenerateInput.R
1463430696b744bad73ac87fedf8884e *R/ModelTraining.R
99ad6a0fe10140c245e449b298ff7d8e *R/PredictCellType.R
be3899dcdcb8a5f9e6dfd44e9bd0e6aa *R/PretrainedModels.R
15445d512e75d1f44a78fe0858be1f8c *R/VisualizeOutput.R
22e524576892f3e7c9a05df101cbacf8 *R/sysdata.rda
d195cc0bd63f64f1d7b9dd9947673e23 *R/utils.R
09bb64ead37a554c13e043bb3e57acb6 *README.md
a89de04b453d87bd9811a1a4a1290f18 *build/vignette.rds
b10cbccf7f35cf9623ba726e51b14138 *inst/COPYRIGHTS
0e8dc63a08ebd60cb2f31bf6a305036b *inst/WORDLIST
70911749e922b6362412e37246df13f0 *inst/doc/MethScope-MRMP.R
958e41b81905fd579e0b724b9dd34ee1 *inst/doc/MethScope-MRMP.Rmd
4fe73a4ba565503a39472f5f7e2fb541 *inst/doc/MethScope-MRMP.html
cd5dcc53cf420db5c46c97283e2890dd *inst/doc/MethScope-Tutorial.R
776a360ba98beb831c0b55ff661e3dcf *inst/doc/MethScope-Tutorial.Rmd
059ef789ebdc71641310090bef75c519 *inst/doc/MethScope-Tutorial.html
9188adac22af8c7ffb1a64e92ebafba0 *inst/extdata/models/Liu2021_MouseBrain_P1000.ubj.gz
93f12cb07c4f3d783874e42e04578f8d *inst/extdata/models/Zhou2025_HumanAtlas_P1000.ubj.gz
8d865fd67287dcb1255775f23bf68b66 *inst/extdata/toy.cg
2840d6e93a635738fb5b825eb7fcb497 *inst/extdata/toy.cg.idx
dfc637d940d1f1096152c1a48619d42d *inst/extdata/toy.cm
cb4b84839134383f76c16cc9ca74e0e7 *man/GenerateInput.Rd
b3f08e0cbf3730562804b959ce3adbf8 *man/GenerateReference.Rd
2c1a65ad05d7ce336e8f84842e9c4761 *man/Input_training.Rd
881dbe317b39e7bb3f3e3b0e9c8bb0fe *man/Liu2021_MouseBrain_P1000.Rd
c83aa9bc1654265581da79591380a5e3 *man/PlotConfusion.Rd
9cc2f3c5173764a3a880f28cfd5b969e *man/PlotF1.Rd
df043e72eb71fa8c35664af5d0985e44 *man/PlotUMAP.Rd
b40e7dfea5726c74230647a082ff96d2 *man/PlotUMAP_fixedwindow.Rd
5199d600c3ee54ebd236c017a3f74156 *man/PredictCellType.Rd
5d2647b22a4332b23d842c354eaed02f *man/Zhou2025_HumanAtlas_P1000.Rd
0762f779ac6cce9e4b76ea62d53136cc *man/confidence_score.Rd
6480e0f8f969f6ff6695f6578246d28b *man/confidence_score_top95.Rd
4ac41e56c637be66dcc777960c01b450 *man/figures/logo.png
42a812a37f82e4e80a6fc00b528edc0c *man/filter_cell.Rd
094161d77803fdeb6175c62b952ba8b7 *man/imputeRowMean.Rd
01210402db539170a43f699072bd948b *man/nnls_deconv.Rd
42f17958a8476003ff7fb4fcdf38c18c *man/smooth_matrix.Rd
1ac8c3835cb7d5f60d589728abe494fb *src/Makevars
4d435c00ac9d981225d03331750bd7f5 *src/bgzf.c
d3381bbe663a7134781129f44047d996 *src/bgzf.h
cc3d1dd896269e7a85b0e1379fc38a1c *src/cdata.h
bff1fa583e3ea8fc926a6d078950151a *src/cfile.c
9694bddaa097916e6b765e2d5b80751d *src/cfile.h
cc045ad9c602302b10f560ed4b55abae *src/decompress.c
9923a552c74b057df184127794a14b09 *src/format.c
c6b0223afe51762368de91ed5744e384 *src/format2.c
1a76ee69154cc7a9eec728e896483e52 *src/format3.c
5e0f2cea22ce831c3c77ce7d7fab5848 *src/format6.c
d818de39a7b0e5eab0b87e1fa40ccafa *src/format7.c
03644a473c3d2c5ffa448bffb8b03f10 *src/index.c
cc104b8d551baeb7e861464baf16750f *src/index.h
da38400f5ab152e8525b2db5d3cec20a *src/init.c
7fc9c51835f3f6cf6123d10419f2f1bc *src/khash.h
cda0dd385273b8c708c4ad99b35e2685 *src/kstring.c
71aae6e907deae92747093dbf70f21d9 *src/kstring.h
996746aac154d40c6fe98b7eb1b3bf01 *src/snames.h
4c2b8cad8170f9874e26bcfb711ba546 *src/summary.c
c0cfd8a8df53879abe8f5d08a43bf7e5 *src/wvec.h
10d6bae7725f0d4bf83da570927deeef *src/wzbed.h
51b196cbff1b534192d9c701a3d0dc0f *src/wzio.h
cc7d33029013ce10747db6c62d96eeff *src/wzmisc.h
7a78c1fb716041d7a8d9e102374a97be *src/wztarget.h
0622a97a2aaa3c342f09636052c2d7f5 *tests/spelling.R
a74f3bfcb7bc5ee971c5d09bd07b409c *tests/testthat.R
975c4262550d76a7aa1ac6d65f9ede91 *tests/testthat/test-pretrained-models.R
958e41b81905fd579e0b724b9dd34ee1 *vignettes/MethScope-MRMP.Rmd
776a360ba98beb831c0b55ff661e3dcf *vignettes/MethScope-Tutorial.Rmd
