Last updated on 2026-10-24 01:51:43 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.1 | 6.03 | 117.19 | 123.22 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.2.1 | 3.68 | 59.98 | 63.66 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.2.1 | 79.01 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.1 | 85.67 | OK | |||
| r-devel-windows-x86_64 | 0.2.1 | 8.00 | 139.00 | 147.00 | OK | |
| r-patched-linux-x86_64 | 0.2.1 | 6.68 | 106.70 | 113.38 | OK | |
| r-release-linux-x86_64 | 0.2.1 | 5.83 | 109.84 | 115.67 | OK | |
| r-release-macos-arm64 | 0.2.1 | 1.00 | 39.00 | 40.00 | OK | |
| r-release-macos-x86_64 | 0.2.1 | 4.00 | 125.00 | 129.00 | OK | |
| r-release-windows-x86_64 | 0.2.1 | 7.00 | 138.00 | 145.00 | OK | |
| r-oldrel-macos-arm64 | 0.2.1 | 1.00 | 41.00 | 42.00 | OK | |
| r-oldrel-macos-x86_64 | 0.2.1 | 4.00 | 121.00 | 125.00 | OK | |
| r-oldrel-windows-x86_64 | 0.2.1 | 12.00 | 162.00 | 174.00 | OK |
Version: 0.2.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [13s/18s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(PSsurvival)
>
> test_check("PSsurvival")
Excluding 10 trimmed observations (weights == 0) from calculations.
Saving _problems/test-surveff-134.R
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 142 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-surveff.R:125:3'): surveff works with Cox censoring and bootstrap variance ──
Error: Failed to extract baseline hazard for treatment group 'A'. Error: subscript out of bounds. This may occur if there are insufficient events in this group.
Backtrace:
▆
1. └─PSsurvival::surveff(...) at test-surveff.R:125:3
2. └─PSsurvival:::surveff_cox(...)
3. └─PSsurvival:::surv_cox(...)
4. └─PSsurvival:::estimate_censoring_score_cox(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
8. └─value[[3L]](cond)
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 142 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘PSsurvival-tutorial.Rmd’ using rmarkdown
Quitting from PSsurvival-tutorial.Rmd:109-133 [surveff-multi]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Failed to extract baseline hazard for treatment group 'A'. Error: subscript out of bounds. This may occur if there are insufficient events in this group.
---
Backtrace:
▆
1. └─PSsurvival::surveff(...)
2. └─PSsurvival:::surveff_cox(...)
3. └─PSsurvival:::surv_cox(...)
4. └─PSsurvival:::estimate_censoring_score_cox(...)
5. └─base::tryCatch(...)
6. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
7. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
8. └─value[[3L]](cond)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'PSsurvival-tutorial.Rmd' failed with diagnostics:
Failed to extract baseline hazard for treatment group 'A'. Error: subscript out of bounds. This may occur if there are insufficient events in this group.
--- failed re-building ‘PSsurvival-tutorial.Rmd’
SUMMARY: processing the following file failed:
‘PSsurvival-tutorial.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc