Last updated on 2026-05-09 12:51:00 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 3.6.1 | 54.81 | 130.20 | 185.01 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 4.0.0 | 30.64 | 165.58 | 196.22 | OK | |
| r-devel-linux-x86_64-fedora-clang | 4.0.0 | 88.00 | 404.61 | 492.61 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 4.0.0 | 85.00 | 386.95 | 471.95 | OK | |
| r-devel-windows-x86_64 | 4.0.0 | 65.00 | 278.00 | 343.00 | OK | |
| r-patched-linux-x86_64 | 3.6.1 | 46.33 | 118.92 | 165.25 | OK | |
| r-release-linux-x86_64 | 3.6.1 | 44.19 | 120.15 | 164.34 | OK | |
| r-release-macos-arm64 | 4.0.0 | 1.00 | 6.00 | 7.00 | ERROR | |
| r-release-macos-x86_64 | 4.0.0 | 36.00 | 279.00 | 315.00 | OK | |
| r-release-windows-x86_64 | 3.6.1 | 79.00 | 156.00 | 235.00 | OK | |
| r-oldrel-macos-arm64 | 4.0.0 | 10.00 | 54.00 | 64.00 | OK | |
| r-oldrel-macos-x86_64 | 4.0.0 | 36.00 | 199.00 | 235.00 | OK | |
| r-oldrel-windows-x86_64 | 4.0.0 | 74.00 | 320.00 | 394.00 | OK |
Version: 3.6.1
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
Note: possible error in 'prior_weightfunction(distribution = "two.sided", ': unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)))
Note: possible error in 'prior_weightfunction(distribution = "two.sided", ': unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)))
Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)))
Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025, 0.05)))
Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05, 0.5)))
Note: possible error in 'prior_weightfunction(distribution = "one.sided", ': unused arguments (distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5)))
See ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/RoBMA.Rcheck/00install.out’ for details.
Information on the location(s) of code generating the ‘Note’s can be
obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
to ‘yes’.
* used C compiler: ‘Debian clang version 21.1.8 (3+b1)’
* used C++ compiler: ‘Debian clang version 21.1.8 (3+b1)’
Flavor: r-devel-linux-x86_64-debian-clang
Version: 3.6.1
Check: R code for possible problems
Result: NOTE
.check_and_list_priors: possible error in
prior_weightfunction(distribution = "two.sided", parameters =
list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused
arguments (distribution = "two.sided", parameters = list(alpha = c(1,
1), steps = c(0.05)))
.check_and_list_priors: possible error in
prior_weightfunction(distribution = "two.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)), prior_weights =
1/12): unused arguments (distribution = "two.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)))
.check_and_list_priors: possible error in
prior_weightfunction(distribution = "one.sided", parameters =
list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused
arguments (distribution = "one.sided", parameters = list(alpha = c(1,
1), steps = c(0.05)))
.check_and_list_priors: possible error in
prior_weightfunction(distribution = "one.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.025, 0.05)), prior_weights =
1/12): unused arguments (distribution = "one.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.025, 0.05)))
.check_and_list_priors: possible error in
prior_weightfunction(distribution = "one.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.05, 0.5)), prior_weights =
1/12): unused arguments (distribution = "one.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.05, 0.5)))
.check_and_list_priors: possible error in
prior_weightfunction(distribution = "one.sided", parameters =
list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5)),
prior_weights = 1/12): unused arguments (distribution = "one.sided",
parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05,
0.5)))
.check_and_list_priors: possible error in
prior_weightfunction(distribution = "two.sided", parameters =
list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/2): unused
arguments (distribution = "two.sided", parameters = list(alpha = c(1,
1), steps = c(0.05)))
.check_and_list_priors: possible error in
prior_weightfunction(distribution = "two.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)), prior_weights = 1/2):
unused arguments (distribution = "two.sided", parameters = list(alpha
= c(1, 1, 1), steps = c(0.05, 0.1)))
check_setup: possible error in prior_weightfunction(distribution =
"two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)),
prior_weights = 1/12): unused arguments (distribution = "two.sided",
parameters = list(alpha = c(1, 1), steps = c(0.05)))
check_setup: possible error in prior_weightfunction(distribution =
"two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.1)), prior_weights = 1/12): unused arguments (distribution =
"two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.1)))
check_setup: possible error in prior_weightfunction(distribution =
"one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)),
prior_weights = 1/12): unused arguments (distribution = "one.sided",
parameters = list(alpha = c(1, 1), steps = c(0.05)))
check_setup: possible error in prior_weightfunction(distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025,
0.05)), prior_weights = 1/12): unused arguments (distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025,
0.05)))
check_setup: possible error in prior_weightfunction(distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.5)), prior_weights = 1/12): unused arguments (distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.5)))
check_setup: possible error in prior_weightfunction(distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps =
c(0.025, 0.05, 0.5)), prior_weights = 1/12): unused arguments
(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1),
steps = c(0.025, 0.05, 0.5)))
check_setup.RoBMA: possible error in prior_weightfunction(distribution
= "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)),
prior_weights = 1/12): unused arguments (distribution = "two.sided",
parameters = list(alpha = c(1, 1), steps = c(0.05)))
check_setup.RoBMA: possible error in prior_weightfunction(distribution
= "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.1)), prior_weights = 1/12): unused arguments (distribution =
"two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.1)))
check_setup.RoBMA: possible error in prior_weightfunction(distribution
= "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)),
prior_weights = 1/12): unused arguments (distribution = "one.sided",
parameters = list(alpha = c(1, 1), steps = c(0.05)))
check_setup.RoBMA: possible error in prior_weightfunction(distribution
= "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025,
0.05)), prior_weights = 1/12): unused arguments (distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025,
0.05)))
check_setup.RoBMA: possible error in prior_weightfunction(distribution
= "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.5)), prior_weights = 1/12): unused arguments (distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.5)))
check_setup.RoBMA: possible error in prior_weightfunction(distribution
= "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps =
c(0.025, 0.05, 0.5)), prior_weights = 1/12): unused arguments
(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1),
steps = c(0.025, 0.05, 0.5)))
check_setup.RoBMA.reg: possible error in
prior_weightfunction(distribution = "two.sided", parameters =
list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused
arguments (distribution = "two.sided", parameters = list(alpha = c(1,
1), steps = c(0.05)))
check_setup.RoBMA.reg: possible error in
prior_weightfunction(distribution = "two.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)), prior_weights =
1/12): unused arguments (distribution = "two.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.05, 0.1)))
check_setup.RoBMA.reg: possible error in
prior_weightfunction(distribution = "one.sided", parameters =
list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12): unused
arguments (distribution = "one.sided", parameters = list(alpha = c(1,
1), steps = c(0.05)))
check_setup.RoBMA.reg: possible error in
prior_weightfunction(distribution = "one.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.025, 0.05)), prior_weights =
1/12): unused arguments (distribution = "one.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.025, 0.05)))
check_setup.RoBMA.reg: possible error in
prior_weightfunction(distribution = "one.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.05, 0.5)), prior_weights =
1/12): unused arguments (distribution = "one.sided", parameters =
list(alpha = c(1, 1, 1), steps = c(0.05, 0.5)))
check_setup.RoBMA.reg: possible error in
prior_weightfunction(distribution = "one.sided", parameters =
list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05, 0.5)),
prior_weights = 1/12): unused arguments (distribution = "one.sided",
parameters = list(alpha = c(1, 1, 1, 1), steps = c(0.025, 0.05,
0.5)))
check_setup.reg: possible error in prior_weightfunction(distribution =
"two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)),
prior_weights = 1/12): unused arguments (distribution = "two.sided",
parameters = list(alpha = c(1, 1), steps = c(0.05)))
check_setup.reg: possible error in prior_weightfunction(distribution =
"two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.1)), prior_weights = 1/12): unused arguments (distribution =
"two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.1)))
check_setup.reg: possible error in prior_weightfunction(distribution =
"one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)),
prior_weights = 1/12): unused arguments (distribution = "one.sided",
parameters = list(alpha = c(1, 1), steps = c(0.05)))
check_setup.reg: possible error in prior_weightfunction(distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025,
0.05)), prior_weights = 1/12): unused arguments (distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025,
0.05)))
check_setup.reg: possible error in prior_weightfunction(distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.5)), prior_weights = 1/12): unused arguments (distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.5)))
check_setup.reg: possible error in prior_weightfunction(distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps =
c(0.025, 0.05, 0.5)), prior_weights = 1/12): unused arguments
(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1),
steps = c(0.025, 0.05, 0.5)))
set_default_priors: possible error in prior_weightfunction(distribution
= "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)),
prior_weights = 1/12): unused arguments (distribution = "two.sided",
parameters = list(alpha = c(1, 1), steps = c(0.05)))
set_default_priors: possible error in prior_weightfunction(distribution
= "two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.1)), prior_weights = 1/12): unused arguments (distribution =
"two.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.1)))
set_default_priors: possible error in prior_weightfunction(distribution
= "one.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)),
prior_weights = 1/12): unused arguments (distribution = "one.sided",
parameters = list(alpha = c(1, 1), steps = c(0.05)))
set_default_priors: possible error in prior_weightfunction(distribution
= "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025,
0.05)), prior_weights = 1/12): unused arguments (distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.025,
0.05)))
set_default_priors: possible error in prior_weightfunction(distribution
= "one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.5)), prior_weights = 1/12): unused arguments (distribution =
"one.sided", parameters = list(alpha = c(1, 1, 1), steps = c(0.05,
0.5)))
set_default_priors: possible error in prior_weightfunction(distribution
= "one.sided", parameters = list(alpha = c(1, 1, 1, 1), steps =
c(0.025, 0.05, 0.5)), prior_weights = 1/12): unused arguments
(distribution = "one.sided", parameters = list(alpha = c(1, 1, 1, 1),
steps = c(0.025, 0.05, 0.5)))
Flavor: r-devel-linux-x86_64-debian-clang
Version: 3.6.1
Check: for code/documentation mismatches
Result: WARN
Codoc mismatches from Rd file 'prior_weightfunction.Rd':
prior_weightfunction
Code: function(side = "one-sided", steps = c(0.025, 0.05), weights =
wf_cumulative(), reference = "most_significant",
prior_weights = 1)
Docs: function(distribution, parameters, prior_weights = 1)
Argument names in code not in docs:
side steps weights reference
Argument names in docs not in code:
distribution parameters
Mismatches in argument names:
Position: 1 Code: side Docs: distribution
Position: 2 Code: steps Docs: parameters
Position: 3 Code: weights Docs: prior_weights
Flavor: r-devel-linux-x86_64-debian-clang
Version: 3.6.1
Check: examples
Result: ERROR
Running examples in ‘RoBMA-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: check_setup
> ### Title: Prints summary of '"RoBMA"' ensemble implied by the specified
> ### priors
> ### Aliases: check_setup check_setup.RoBMA
>
> ### ** Examples
>
> # check default RoBMA setup
> check_setup()
Error in prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, :
unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)))
Calls: check_setup ... .check_and_list_priors -> .check_and_list_component_priors
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 3.6.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [1s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(vdiffr)
> library(RoBMA)
Loading required namespace: runjags
Loading required namespace: mvtnorm
RoBMA version 3.3 now features spike-and-slab style model-averaging via the 'algorithm = "ss"' argument.
See 'vignette("FastRoBMA", package = "RoBMA")' for more details ('algorithm = "ss"' argument will become the default setting in the future major release of the package).
>
> test_check("RoBMA")
Saving _problems/test-00-CRAN-13.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-00-CRAN.R:13:3'): Basic functionality works ────────────────────
Error in `prior_weightfunction(distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)), prior_weights = 1/12)`: unused arguments (distribution = "two.sided", parameters = list(alpha = c(1, 1), steps = c(0.05)))
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-00-CRAN.R:13:3
2. │ └─base::withCallingHandlers(...)
3. └─RoBMA::RoBMA(...)
4. ├─RoBMA:::.check_and_list_priors(...)
5. │ └─RoBMA:::.check_and_list_component_priors(...)
6. └─RoBMA::set_default_priors("bias", rescale = rescale_priors)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 4.0.0
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavor: r-release-macos-arm64