Last updated on 2026-10-24 12:51:49 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.5.1 | 7.42 | 142.48 | 149.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.5.1 | 5.09 | 69.06 | 74.15 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.5.1 | 100.62 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.5.1 | 103.87 | OK | |||
| r-devel-windows-x86_64 | 0.5.1 | 11.00 | 141.00 | 152.00 | OK | |
| r-patched-linux-x86_64 | 0.5.1 | 7.34 | 133.40 | 140.74 | OK | |
| r-release-linux-x86_64 | 0.5.1 | 7.11 | 133.25 | 140.36 | OK | |
| r-release-macos-arm64 | 0.5.1 | 2.00 | 36.00 | 38.00 | OK | |
| r-release-macos-x86_64 | 0.5.1 | 5.00 | 149.00 | 154.00 | OK | |
| r-release-windows-x86_64 | 0.5.1 | 10.00 | 132.00 | 142.00 | OK | |
| r-oldrel-macos-arm64 | 0.5.1 | OK | ||||
| r-oldrel-macos-x86_64 | 0.5.1 | 5.00 | 142.00 | 147.00 | OK | |
| r-oldrel-windows-x86_64 | 0.5.1 | 13.00 | 196.00 | 209.00 | OK |
Version: 0.5.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [5s/5s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(SurvMetrics)
> Sys.setenv("OMP_THREAD_LIMIT" = 1)
> test_check("SurvMetrics")
randomForestSRC 3.9.0
Type rfsrc.news() to see new features, changes, and bug fixes.
Loading required package: prodlim
Saving _problems/test-Brier-43.R
Saving _problems/test-Cindex-70.R
Saving _problems/test-IAEISE-13.R
Saving _problems/test-IBS-13.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 38 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-Brier.R:43:3'): Brier ──────────────────────────────────────────
<subscriptOutOfBoundsError/error/condition>
Error in `a$specials[[i]]`: subscript out of bounds
Backtrace:
▆
1. ├─testthat::expect_type(Brier(coxfit, test_data), "double") at test-Brier.R:43:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─SurvMetrics::Brier(coxfit, test_data)
5. ├─pec::predictSurvProb(obj, test_data, t_star0)
6. └─pec:::predictSurvProb.coxph(obj, test_data, t_star0)
7. └─riskRegression::predictCox(...)
8. └─riskRegression::coxVariableName(object, model.frame = object.modelFrame)
9. └─stats::delete.response(...)
10. └─stats (local) off(a$specials[[i]])
── Error ('test-Cindex.R:70:3'): Cindex ────────────────────────────────────────
<subscriptOutOfBoundsError/error/condition>
Error in `a$specials[[i]]`: subscript out of bounds
Backtrace:
▆
1. ├─testthat::expect_type(Cindex(coxfit, test_data), "double") at test-Cindex.R:70:3
2. │ └─testthat::quasi_label(enquo(object))
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─SurvMetrics::Cindex(coxfit, test_data)
5. ├─pec::predictSurvProb(obj, test_data, t_star0)
6. └─pec:::predictSurvProb.coxph(obj, test_data, t_star0)
7. └─riskRegression::predictCox(...)
8. └─riskRegression::coxVariableName(object, model.frame = object.modelFrame)
9. └─stats::delete.response(...)
10. └─stats (local) off(a$specials[[i]])
── Error ('test-IAEISE.R:13:3'): IAEISE ────────────────────────────────────────
<subscriptOutOfBoundsError/error/condition>
Error in `a$specials[[i]]`: subscript out of bounds
Backtrace:
▆
1. ├─pec::predictSurvProb(coxfit, test_data, distime) at test-IAEISE.R:13:3
2. └─pec:::predictSurvProb.coxph(coxfit, test_data, distime)
3. └─riskRegression::predictCox(...)
4. └─riskRegression::coxVariableName(object, model.frame = object.modelFrame)
5. └─stats::delete.response(...)
6. └─stats (local) off(a$specials[[i]])
── Error ('test-IBS.R:13:3'): IBS ──────────────────────────────────────────────
<subscriptOutOfBoundsError/error/condition>
Error in `a$specials[[i]]`: subscript out of bounds
Backtrace:
▆
1. ├─pec::predictSurvProb(coxfit, test_data, distime) at test-IBS.R:13:3
2. └─pec:::predictSurvProb.coxph(coxfit, test_data, distime)
3. └─riskRegression::predictCox(...)
4. └─riskRegression::coxVariableName(object, model.frame = object.modelFrame)
5. └─stats::delete.response(...)
6. └─stats (local) off(a$specials[[i]])
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 38 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc