Last updated on 2026-03-25 01:55:17 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.25 | 273.36 | 287.61 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.15 | 293.40 | 304.55 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 24.00 | 293.39 | 317.39 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 347.80 | 378.80 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 24.00 | 192.00 | 216.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.04 | 333.31 | 347.35 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.91 | 345.24 | 359.15 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 439.00 | 450.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 194.00 | 216.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 457.00 | 467.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 282.00 | 306.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [100s/402s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.057, elapsed: 2.189 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.576, system: 0.081, elapsed: 13.002 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.018, elapsed: 0.422 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.702, system: 0.712, elapsed: 36.063 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.177 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.833, system: 0.894, elapsed: 52.528 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.529, system: 0.032, elapsed: 1.840 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.708, system: 0.090, elapsed: 13.290 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.015, elapsed: 0.811 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.975, system: 0.813, elapsed: 107.154 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.006, elapsed: 0.260 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.183, system: 0.977, elapsed: 124.005 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.497, system: 0.029, elapsed: 2.933 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.581, system: 0.052, elapsed: 13.902 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.017, elapsed: 0.943 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.894, system: 0.800, elapsed: 112.083 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.002, elapsed: 0.264 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.238, system: 0.220, elapsed: 1.227 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.274, system: 1.161, elapsed: 132.363 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.530, system: 0.035, elapsed: 2.393 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.544, system: 0.068, elapsed: 13.785 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.016, elapsed: 0.709 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.650, system: 0.698, elapsed: 48.622 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.006, elapsed: 0.259 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 13.391, system: 0.794, elapsed: 20.045 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.194, system: 1.644, elapsed: 86.783 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/414s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.042, elapsed: 1.733 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.509, system: 0.073, elapsed: 13.326 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.017, elapsed: 0.968 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.076, system: 0.775, elapsed: 62.356 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.172 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.126, system: 0.932, elapsed: 79.225 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.588, system: 0.044, elapsed: 1.749 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.532, system: 0.077, elapsed: 12.936 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.236, system: 0.018, elapsed: 0.776 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.758, system: 0.852, elapsed: 139.646 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.242 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.855, system: 1.016, elapsed: 156.049 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.550, system: 0.034, elapsed: 2.695 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.482, system: 0.062, elapsed: 14.984 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.211, system: 0.015, elapsed: 0.613 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.340, system: 0.646, elapsed: 31.054 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.007, elapsed: 0.183 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.252, system: 0.329, elapsed: 1.023 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.684, system: 1.121, elapsed: 51.536 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.601, system: 0.038, elapsed: 2.624 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.537, system: 0.074, elapsed: 13.248 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.016, elapsed: 1.161 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.513, system: 0.757, elapsed: 80.188 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.200 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 14.461, system: 0.976, elapsed: 22.404 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.164, system: 1.895, elapsed: 120.792 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64