Last updated on 2026-07-10 00:53:10 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.9.23 | 4.19 | 131.62 | 135.81 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.9.23 | 2.80 | 97.30 | 100.10 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.9.23 | 232.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.9.23 | 269.49 | OK | |||
| r-devel-windows-x86_64 | 0.9.23 | 5.00 | 189.00 | 194.00 | OK | |
| r-patched-linux-x86_64 | 0.9.23 | 4.48 | 134.85 | 139.33 | OK | |
| r-release-linux-x86_64 | 0.9.23 | 3.18 | 135.56 | 138.74 | OK | |
| r-release-macos-arm64 | 0.9.23 | 1.00 | 39.00 | 40.00 | OK | |
| r-release-macos-x86_64 | 0.9.23 | 3.00 | 233.00 | 236.00 | OK | |
| r-release-windows-x86_64 | 0.9.23 | 5.00 | 176.00 | 181.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.9.23 | OK | ||||
| r-oldrel-macos-x86_64 | 0.9.23 | 3.00 | 189.00 | 192.00 | OK | |
| r-oldrel-windows-x86_64 | 0.9.23 | 7.00 | 215.00 | 222.00 | OK |
Version: 0.9.23
Check: tests
Result: ERROR
Running ‘testthat.R’ [69s/83s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(rptR)
>
> test_check("rptR")
Bootstrap Progress:
Bootstrap Progress:
Permutation Progress for Population :
Bootstrap Progress:
Permutation Progress for Container:
Bootstrap Progress:
Permutation Progress for Population:
Bootstrap Progress:
Permutation Progress for Population:
Bootstrap Progress:
Saving _problems/test-rptBinary-30.R
Bootstrap Progress:
Permutation Progress for Population :
Bootstrap Progress:
Permutation Progress for Container :
Permutation Progress for Population :
Bootstrap Progress:
Permutation Progress for Container :
Permutation Progress for Population :
Bootstrap Progress:
Permutation Progress for Container:
Bootstrap Progress:
Permutation Progress for Container:
Permutation Progress for Population:
Bootstrap Progress:
Permutation Progress for Container:
Bootstrap Progress:
Permutation Progress for Container:
Permutation Progress for Habitat:
Bootstrap Progress:
Permutation Progress for Population:
Bootstrap Progress:
Permutation Progress for Container:
Permutation Progress for Population:
Bootstrap Progress:
Permutation Progress for Population :
Bootstrap Progress:
Permutation Progress for Container:
Bootstrap Progress:
Permutation Progress for Population:
Bootstrap Progress:
Permutation Progress for Population:
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 171 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-rptBinary.R:30:1'): (code run outside of `test_that()`) ────────
<Rcpp::exception/C++Error/error/condition>
Error: Downdated VtV is not positive definite
Backtrace:
▆
1. └─rptR::rptBinary(...) at test-rptBinary.R:30:1
2. └─rptR:::bootstrap_nongaussian(...)
3. ├─rptR:::with_warnings(...)
4. │ └─base::withCallingHandlers(expr, warning = wHandler)
5. ├─base::unname(...)
6. └─pbapply::pblapply(Ysim, bootstr, mod, formula, data, grname)
7. └─base::lapply(X, FUN, ...)
8. └─rptR (local) FUN(X[[i]], ...)
9. └─rptR (local) R_pe(formula, data, grname)
10. └─lme4::glmer(...)
11. └─lme4::optimizeGlmer(...)
12. └─lme4:::optwrap(...)
13. ├─base::withCallingHandlers(...)
14. ├─base::do.call(optfun, arglist)
15. └─lme4 (local) `<fn>`(...)
16. ├─nM$newf(fn(nM$xeval()))
17. │ └─base::stopifnot(length(value <- as.numeric(value)) == 1L)
18. └─lme4 (local) fn(nM$xeval())
19. └─lme4 (local) pwrssUpdate(...)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 171 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.9.23
Check: tests
Result: ERROR
Running 'testthat.R' [86s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(rptR)
>
> test_check("rptR")
Bootstrap Progress:
Bootstrap Progress:
Permutation Progress for Population :
Bootstrap Progress:
Permutation Progress for Container:
Bootstrap Progress:
Permutation Progress for Population:
Bootstrap Progress:
Permutation Progress for Population:
Bootstrap Progress:
Permutation Progress for Population:
Saving _problems/test-rptBinary-73.R
Bootstrap Progress:
Permutation Progress for Population :
Bootstrap Progress:
Permutation Progress for Container :
Permutation Progress for Population :
Bootstrap Progress:
Permutation Progress for Container :
Permutation Progress for Population :
Bootstrap Progress:
Permutation Progress for Container:
Bootstrap Progress:
Permutation Progress for Container:
Permutation Progress for Population:
Bootstrap Progress:
Permutation Progress for Container:
Bootstrap Progress:
Permutation Progress for Container:
Permutation Progress for Habitat:
Bootstrap Progress:
Permutation Progress for Population:
Bootstrap Progress:
Permutation Progress for Container:
Permutation Progress for Population:
Bootstrap Progress:
Permutation Progress for Population :
Bootstrap Progress:
Permutation Progress for Container:
Bootstrap Progress:
Permutation Progress for Population:
Bootstrap Progress:
Permutation Progress for Population:
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 183 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-rptBinary.R:72:1'): (code run outside of `test_that()`) ────────
<Rcpp::exception/C++Error/error/condition>
Error: Downdated VtV is not positive definite
Backtrace:
▆
1. └─rptR::rptBinary(...) at test-rptBinary.R:72:1
2. └─rptR (local) R_pe(formula, data, grname)
3. └─lme4::glmer(...)
4. └─lme4::optimizeGlmer(...)
5. └─lme4:::optwrap(...)
6. ├─base::withCallingHandlers(...)
7. ├─base::do.call(optfun, arglist)
8. └─lme4 (local) `<fn>`(...)
9. ├─nM$newf(fn(nM$xeval()))
10. │ └─base::stopifnot(length(value <- as.numeric(value)) == 1L)
11. └─lme4 (local) fn(nM$xeval())
12. └─lme4 (local) pwrssUpdate(...)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 183 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-windows-x86_64