Last updated on 2026-10-24 12:51:49 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.6 | 4.11 | 60.49 | 64.60 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.6 | 3.01 | 36.60 | 39.61 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.6 | 61.35 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.6 | 51.48 | OK | |||
| r-devel-windows-x86_64 | 0.1.6 | 5.00 | 81.00 | 86.00 | OK | |
| r-patched-linux-x86_64 | 0.1.6 | 4.02 | 55.32 | 59.34 | OK | |
| r-release-linux-x86_64 | 0.1.6 | 3.95 | 55.86 | 59.81 | OK | |
| r-release-macos-arm64 | 0.1.6 | 1.00 | 23.00 | 24.00 | OK | |
| r-release-macos-x86_64 | 0.1.6 | 3.00 | 80.00 | 83.00 | OK | |
| r-release-windows-x86_64 | 0.1.6 | 6.00 | 74.00 | 80.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.6 | OK | ||||
| r-oldrel-macos-x86_64 | 0.1.6 | 3.00 | 77.00 | 80.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.6 | 8.00 | 89.00 | 97.00 | OK |
Version: 0.1.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘pseudo.Rmd’ using rmarkdown
Quitting from pseudo.Rmd:277-287 [test3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `a$specials[[i]]`:
! subscript out of bounds
---
Backtrace:
▆
1. ├─survival::survfit(cfit3, newdata = list(x = c("Maintained", "Nonmaintained")))
2. └─survival:::survfit.coxph(...)
3. └─survival:::model.matrix.coxph(object, data = mf)
4. └─stats::delete.response(object$terms)
5. └─stats (local) off(a$specials[[i]])
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'pseudo.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building ‘pseudo.Rmd’
--- re-building ‘ridge.Rmd’ using rmarkdown
Quitting from ridge.Rmd:113-126 [pass5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `a$specials[[i]]`:
! subscript out of bounds
---
Backtrace:
▆
1. ├─stats::predict(cfit3)
2. ├─survival:::predict.coxph.penal(cfit3)
3. ├─base::NextMethod("predict", object, ...)
4. └─survival:::predict.coxph(cfit3)
5. └─stats::delete.response(Terms)
6. └─stats (local) off(a$specials[[i]])
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'ridge.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building ‘ridge.Rmd’
--- re-building ‘royston.Rmd’ using rmarkdown
Quitting from royston.Rmd:144-147 [termplot]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `a$specials[[i]]`:
! subscript out of bounds
---
Backtrace:
▆
1. └─stats::termplot(...)
2. ├─stats::predict(model, type = "terms", se.fit = se, terms = terms)
3. └─survival:::predict.coxph(...)
4. └─stats::delete.response(Terms)
5. └─stats (local) off(a$specials[[i]])
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'royston.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building ‘royston.Rmd’
--- re-building ‘tutorial.Rmd’ using rmarkdown
Quitting from tutorial.Rmd:325-331 [aidscurve]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `a$specials[[i]]`:
! subscript out of bounds
---
Backtrace:
▆
1. ├─survival::survfit(cfit0, newdata = dummy)
2. └─survival:::survfit.coxphms(cfit0, newdata = dummy)
3. ├─stats::model.matrix(object, data = mf)
4. └─survival:::model.matrix.coxph(object, data = mf)
5. └─stats::delete.response(object$terms)
6. └─stats (local) off(a$specials[[i]])
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'tutorial.Rmd' failed with diagnostics:
subscript out of bounds
--- failed re-building ‘tutorial.Rmd’
SUMMARY: processing the following files failed:
‘pseudo.Rmd’ ‘ridge.Rmd’ ‘royston.Rmd’ ‘tutorial.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc