VizModules 0.2.0
- Created the Figure Builder app so that users can dynamically
construct multi-panel figures using different data sets and plot types
on a single page. Allows for full page SVG export, source data dump
organized per panel, and full customization of plot position and
size.
- All
*OutputUI() functions gained a
resizable argument (default TRUE). When
FALSE, the plot output is no longer wrapped in
shinyjqui::jqui_resizable(), which avoids a redundant
resize handle when the output is embedded in a container that already
provides resizing (such as the Figure Builder app cards).
- Added a new
plotthis_DotPlot module
(plotthis_DotPlotInputsUI(),
plotthis_DotPlotOutputUI(),
plotthis_DotPlotServer(), and the
plotthis_DotPlotApp() convenience wrapper) that wraps
plotthis::DotPlot() for interactive dot plots, including a
custom dot-size legend since plotly still lacks that capability.
- Added the
example_markers dataset, a simulated
single-cell marker-gene expression table (immune cell types × marker
genes) used as the default example data for the DotPlot module.
- Added “Source Data” download button at the bottom of every module’s
control panel. The button creates and downloads a ZIP file containing a
self-contained HTML of the plotly plot, a CSV of the plot data
(retrieved via
plotly::plotly_data()), and for modules with
statistics enabled (Box / Violin / yPlot), a table of the statistics
info. Source downloads are now built from the exported
collect_source_data() and
create_source_download_handler() helpers, and each module
server returns its source reactive so it can be reused (e.g. by the
Figure Builder). Given source data is now required by many journals,
this is important.
- Removed old interactive plot download button and associated helper
function.
- Removed old dynamically hidden stats download button and associated
logic, since stats are now included in the source download when
applicable.
- Statistic helper functions are now exported allowing users to
annotate plotly graphs with custom statistics:
compute_pairwise_stats(),
create_stat_annotations(),
apply_stat_annotations(),
generate_pair_strings(), and
parse_pair_strings().
- Exposed
empty_plot() for use as a placeholder, e.g. if
parameters aren’t valid for a given plot type, to pass that info to user
without ugly error messages.
- Faceting improvements - new internal helpers that control subplot
spacing, subplot size, and facet_scale handling. This fixes much of the
wonkiness for plots with many panels. Uniform inputs added for panel
spacing across all modules.
- Axis titles now uniformly added as annotations to allow interactive
repositioning.
- Condensed package wide workflows with simple helpers,
e.g.
.apply_title_layout(), resulting in significantly less
jank.
- Axis adjustments are now properly reflected in axis/legend titles
for appropriate modules, e.g.
yPlot,
scatterPlot, linePlot.
- Removed a handful of spurious/non-functional inputs, particularly
for the
dittoViz_scatterPlot module.
- Custom
size.by legends added for
plotthis_DotPlot and dittoViz_scatterPlot
modules, since plotly does not yet support these.
- Update docstrings to reflect new inputs and features and clarify
which parameters of underlying plotting functions may not be
implemented.
- Various border fixes for faceted plots.
VizModules 0.1.1
- Minor DESCRIPTION and doc fixes for CRAN compliance.
VizModules 0.1.0