CEDA: CRISPR Screen and Gene Expression Differential Analysis

Provides analytical methods for analyzing CRISPR screen data at different levels of gene expression. Multi-component normal mixture models and EM algorithms are used for modeling.

Version: 1.1.0
Depends: R (≥ 3.5.0), limma
Imports: stats, mixtools, ggplot2, dplyr, ggsci, ggridges, ggprism
Suggests: knitr, rmarkdown
Published: 2022-08-11
Author: Lianbo Yu [aut, cre], Yue Zhao [aut], Kevin R. Coombes [aut], Lang Li [aut]
Maintainer: Lianbo Yu <Lianbo.Yu at osumc.edu>
License: Apache License (== 2.0)
NeedsCompilation: no
Materials: README
CRAN checks: CEDA results

Documentation:

Reference manual: CEDA.pdf
Vignettes: CRISPR Screen and Gene Expression Differential Analysis

Downloads:

Package source: CEDA_1.1.0.tar.gz
Windows binaries: r-devel: CEDA_1.1.0.zip, r-release: CEDA_1.1.0.zip, r-oldrel: CEDA_1.1.0.zip
macOS binaries: r-release (arm64): CEDA_1.1.0.tgz, r-oldrel (arm64): CEDA_1.1.0.tgz, r-release (x86_64): CEDA_1.1.0.tgz
Old sources: CEDA archive

Linking:

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